Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq15509 102 5e-20 seq1376 100 2e-19 >seq15509 Length=12340 Score = 102 bits (112), Expect = 5e-20 Identities = 94/117 (80%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||| | |||| ||| || | | | ||| | || |||| Sbjct 7004 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCTGAACCTGACCAAAGGTCAAG---GCCC 7059 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 7060 AATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 7116 >seq1376 Length=1996 Score = 100 bits (110), Expect = 2e-19 Identities = 92/114 (81%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 4 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGAT 63 |||||| |||| |||| | |||| ||| |||| ||||| ||| | ||| || || Sbjct 709 CCCAAAACCTTTACTTTCGC-TAAGATGCTGAGCTAGTCATAATAA--ACAAGCCCAAAT 653 Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 652 CTCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278359187430