Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01-
16] 15,637 sequences; 44,910,645 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1376 143 5e-32
seq15509 129 1e-27
seq6963 87.8 3e-15
>seq1376
Length=1996
Score = 143 bits (158), Expect = 5e-32
Identities = 183/247 (74%), Gaps = 5/247 (2%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTAGCATGG 132
|||| ||| |||| |||||||| ||||||||| || ||| |||| |||||||||
Sbjct 354 TTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTCAAGCTTGAATGTGTTAGCATGG 413
Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192
|||||| |||| ||| | | | ||||| ||||||| || || |||||||| |
Sbjct 414 AATAATGAAATATGACTTATGTTCTTATTTCGTTGGTTGA-AGAACTTGAGTAATGATGA 472
Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
|||| | || ||||| | ||||| | | |||||||||||||||||||| | |
Sbjct 473 ATAGAAACGGTTGGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGGATTGACCG 532
Query 253 AAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
||||| ||||||||||||||| || ||| |||| ||||||||| |||| | | ||||
Sbjct 533 AAGACAAACTACTGCGAAAGCATTTGACCCAGGACGTTTTCATTGATCA-AGGTCTAAAG 591
Query 312 TTAGGGG 318
|| ||||
Sbjct 592 TTGGGGG 598
>seq15509
Length=12340
Score = 129 bits (142), Expect = 1e-27
Identities = 182/248 (73%), Gaps = 7/248 (3%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATGG 132
|||| ||| |||| ||| || |||||| |||||| || | |||| |||||||||
Sbjct 7363 TTACCATGAGCAAATCAGAATGCTCAAAGTAGGCCTAAGCGCCTGAATGTGTTAGCATGG 7304
Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC-GTAATGATT 191
|||||| |||||||| | | | | |||||||||||| ||| | ||||||
Sbjct 7303 AATAATGAAATAGGACTCGAGTCT-TGTTTTGTTGGTTTACTTGACATTGAGAAATGATG 7245
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||||| | || ||||| | ||||| | ||||||||||||||||||||
Sbjct 7244 AATAGGAACGGTTGGGGGCATTTGTATTTGGCCGCTAGAGGTGAAATTCTTGGATTGGCC 7185
Query 252 GAAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
|||||| ||||||||||||||| || ||| |||| ||||||||| ||||| | || |||
Sbjct 7184 GAAGACAAACTACTGCGAAAGCATTTGACCCAGGACGTTTTCATTGATCAG-GGACTAAA 7126
Query 311 GTT-AGGG 317
||| ||||
Sbjct 7125 GTTGAGGG 7118
>seq6963
Length=136102
Score = 87.8 bits (96), Expect = 3e-15
Identities = 76/92 (83%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC-GTTCACCAAGGAT 286
|||||||||||||||||||| | |||||| |||||||||||||| || ||| ||||
Sbjct 12603 AGAGGTGAAATTCTTGGATTGACCGAAGACAGACTACTGCGAAAGCATTTGACCCAGGAC 12544
Query 287 GTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||| |||| | | |||||||||||
Sbjct 12543 GTTTTCATTGATCA-AGGTCTAAAGTTAGGGG 12513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915056890176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |