Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1376 143 5e-32 seq15509 129 1e-27 seq6963 87.8 3e-15 >seq1376 Length=1996 Score = 143 bits (158), Expect = 5e-32 Identities = 183/247 (74%), Gaps = 5/247 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTAGCATGG 132 |||| ||| |||| |||||||| ||||||||| || ||| |||| ||||||||| Sbjct 354 TTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTCAAGCTTGAATGTGTTAGCATGG 413 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||| |||| ||| | | | ||||| ||||||| || || |||||||| | Sbjct 414 AATAATGAAATATGACTTATGTTCTTATTTCGTTGGTTGA-AGAACTTGAGTAATGATGA 472 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 |||| | || ||||| | ||||| | | |||||||||||||||||||| | | Sbjct 473 ATAGAAACGGTTGGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGGATTGACCG 532 Query 253 AAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||||||||||||| || ||| |||| ||||||||| |||| | | |||| Sbjct 533 AAGACAAACTACTGCGAAAGCATTTGACCCAGGACGTTTTCATTGATCA-AGGTCTAAAG 591 Query 312 TTAGGGG 318 || |||| Sbjct 592 TTGGGGG 598 >seq15509 Length=12340 Score = 129 bits (142), Expect = 1e-27 Identities = 182/248 (73%), Gaps = 7/248 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATGG 132 |||| ||| |||| ||| || |||||| |||||| || | |||| ||||||||| Sbjct 7363 TTACCATGAGCAAATCAGAATGCTCAAAGTAGGCCTAAGCGCCTGAATGTGTTAGCATGG 7304 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC-GTAATGATT 191 |||||| |||||||| | | | | |||||||||||| ||| | |||||| Sbjct 7303 AATAATGAAATAGGACTCGAGTCT-TGTTTTGTTGGTTTACTTGACATTGAGAAATGATG 7245 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | || ||||| | ||||| | |||||||||||||||||||| Sbjct 7244 AATAGGAACGGTTGGGGGCATTTGTATTTGGCCGCTAGAGGTGAAATTCTTGGATTGGCC 7185 Query 252 GAAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||| ||||||||||||||| || ||| |||| ||||||||| ||||| | || ||| Sbjct 7184 GAAGACAAACTACTGCGAAAGCATTTGACCCAGGACGTTTTCATTGATCAG-GGACTAAA 7126 Query 311 GTT-AGGG 317 ||| |||| Sbjct 7125 GTTGAGGG 7118 >seq6963 Length=136102 Score = 87.8 bits (96), Expect = 3e-15 Identities = 76/92 (83%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC-GTTCACCAAGGAT 286 |||||||||||||||||||| | |||||| |||||||||||||| || ||| |||| Sbjct 12603 AGAGGTGAAATTCTTGGATTGACCGAAGACAGACTACTGCGAAAGCATTTGACCCAGGAC 12544 Query 287 GTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||| | | ||||||||||| Sbjct 12543 GTTTTCATTGATCA-AGGTCTAAAGTTAGGGG 12513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915056890176