Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq87 109 8e-22 >seq87 Length=7295 Score = 109 bits (120), Expect = 8e-22 Identities = 167/239 (70%), Gaps = 22/239 (9%) Strand=Plus/Plus Query 10 CCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTG 69 ||| ||| | ||||| |||||| |||||||| | || || | || ||| |||| ||| Sbjct 2979 CCAGCACTGAGCAGGTATCAGTCTTTATACATCTAGTTTCC-TATTAGCAAAGACCGGTG 3037 Query 70 TTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGT 129 |||| |||||||||||| | |||||||| ||| || | || || | |||| Sbjct 3038 TTTTAAGTAAACAGTCGTACTCTTCTATTCTGTGCCACGATCAT------AAAAATTCGT 3091 Query 130 TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAAC 189 || ||||||||||||||||||| | ||||||||||| |||||| | Sbjct 3092 --------------ACTCCTTCTCCCGAAGTTACGGAGTCATTTTGCCGAGTTCCTTCAA 3137 Query 190 CACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||| | | |||||||| |||| |||||| | ||| ||||||||||| |||| Sbjct 3138 GATGATTCGCTC-AACGCCTTGGTATATTCTACCAGCAGACCAGTGTCGGTTTAGGGTA 3195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694294809901