Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq87 105 1e-20 >seq87 Length=7295 Score = 105 bits (116), Expect = 1e-20 Identities = 175/249 (70%), Gaps = 19/249 (8%) Strand=Plus/Plus Query 109 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC 168 ||||||| |||| |||||||||||| |||| ||||||||| | || | | | || | Sbjct 2899 GCTACCTGAGGATCGTTATAGTTACAACCGCTGTTTACTGGAGGTTCAAT---CAGCACC 2955 Query 169 GATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACAT 228 | | | | | | ||| || | ||||||| | ||||| |||| ||||||| Sbjct 2956 G-----TATTAGTGCCTCTCTTGACTTACCAGCACTGAGCAGGTATCAGTCTTTATACAT 3010 Query 229 CGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCG----CTTGGGCCTATT 284 | || | |||||| | ||| ||||||| ||||||||||| ||| ||||| Sbjct 3011 CTAGTTTCCTATTAGCAAAGACCGGTGTTTTAAGTAAACAGTCGTACTCTT----CTATT 3066 Query 285 CTCTGCGGCCTGTCATAGACAGGC--ACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCC 342 || ||| | ||||| | | | || ||||||||| ||||||||| ||||||||||| Sbjct 3067 CTGTGCCACGA-TCATAAAAATTCGTACTCCTTCTCCCGAAGTTACGGAGTCATTTTGCC 3125 Query 343 GAGTTCCTT 351 ||||||||| Sbjct 3126 GAGTTCCTT 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062233872512