Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq15509 426 3e-117 seq2836 426 3e-117 seq2642 156 7e-36 seq589 102 1e-19 >seq15509 Length=12340 Score = 426 bits (472), Expect = 3e-117 Identities = 256/269 (95%), Gaps = 5/269 (2%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2616 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 2675 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 2676 TAGTGGGTGAACAATCCAACGCTTACTGAATTCTGCTTCAGTATGATAGGAAGAGCCGAC 2735 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2736 ATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 2795 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG-----GGACTAAAGGATCGA 266 |||||||||||||||||||||||||||||||||| | ||| | |||||||||||| Sbjct 2796 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATCTTGAGAAAAATGTCTAAAGGATCGA 2855 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 2856 TAGGCCACACTTTCATGGTTTGTATTCAC 2884 Score = 75.2 bits (82), Expect = 2e-11 Identities = 41/41 (100%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||| Sbjct 11229 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 11269 >seq2836 Length=1950 Score = 426 bits (472), Expect = 3e-117 Identities = 256/269 (95%), Gaps = 5/269 (2%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 433 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 492 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 493 TAGTGGGTGAACAATCCAACGCTTACTGAATTCTGCTTCAGTATGATAGGAAGAGCCGAC 552 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553 ATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 612 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG-----GGACTAAAGGATCGA 266 |||||||||||||||||||||||||||||||||| | ||| | |||||||||||| Sbjct 613 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATCTTGAGAAAAATGTCTAAAGGATCGA 672 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 673 TAGGCCACACTTTCATGGTTTGTATTCAC 701 >seq2642 Length=150333 Score = 156 bits (172), Expect = 7e-36 Identities = 125/151 (83%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||| || ||| |||| | |||||||| ||||||||| | Sbjct 99999 CATCAGTAGGGTAAAACTAACTTGCTTCACGACGATGTAAACCCAATCCACGTTCCCAAC 100058 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 || | ||| |||||||||| |||||| |||| || ||| |||||||||||||||||| | Sbjct 100059 TACTTGGTAAACAATCCAAAGCTTACTTAATTATGATTCAGTATGATAGGAAGAGCCGGC 100118 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGA 182 || ||| ||||||| | ||||||||||||| Sbjct 100119 ATTGAACTATCAAAATGTAACGTCGCTATGA 100149 >seq589 Length=254062 Score = 102 bits (112), Expect = 1e-19 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239369 GACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 239311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854266397472