Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq87 89.7 1e-15 >seq87 Length=7295 Score = 89.7 bits (98), Expect = 1e-15 Identities = 167/245 (68%), Gaps = 18/245 (7%) Strand=Plus/Minus Query 112 GGACAGTG-TCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| | | | ||||||||| ||||||||| |||||| | |||| ||||| Sbjct 1778 GGACAGTGATTAAT-GGGCAGTTTATCTGGGGCGGATTTCTCCCATATAGTACCGGAGAA 1720 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCAT---------GCGCAC-------AGTG 214 | ||||| | || | |||||||||||||| | | || |||| Sbjct 1719 GTACAAAGGTCGGCTTAAATTGGATGGAAACCAATGGGTTAAAGAGAACCTAATTAAGTG 1660 Query 215 CAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGC 274 || |||| ||| | || |||| | || |||||| ||| ||| |||| || | Sbjct 1659 TAATGGCATAAGCCGGCTTAACTGTAAGACTGACAAGTCATACAGATACGCAAGTAGGTC 1600 Query 275 TTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGG 334 || |||||||| ||| | |||||| |||| |||||| ||| ||||||||||| || | Sbjct 1599 ATAGTGATCCGGTGGTCCATTATGGAATGGCCATCGCTCAACGAATAAAAGCTACGCTAG 1540 Query 335 GGATA 339 ||||| Sbjct 1539 GGATA 1535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982246382112