Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq15509 95.1 7e-18 seq1376 93.3 3e-17 >seq15509 Length=12340 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 6408 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 6466 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 6467 TAAT-CAACGCAAGCT 6481 >seq1376 Length=1996 Score = 93.3 bits (102), Expect = 3e-17 Identities = 70/77 (91%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 49 CTCACTA-AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||| | ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1308 CTCACTATAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 1251 Query 108 GTAATACAACGCAAGCT 124 ||||| ||||||||||| Sbjct 1250 GTAAT-CAACGCAAGCT 1235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300755903660