Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1315 132 1e-28 >seq1315 Length=3060 Score = 132 bits (146), Expect = 1e-28 Identities = 233/334 (70%), Gaps = 9/334 (3%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||| ||||||||||||||||||||||||||| | | |||| ||| | ||||||| Sbjct 2395 GATTAGGTAGTTGGTAAGGTAACGGCTTACCAAGCCAATGATCTATAGTTGGTCTGAGAG 2336 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGA--GGCAGCAGTG 284 | |||| ||||| ||| | ||||| | || ||| || | | | |||||||||| Sbjct 2335 GACGATCAACCACAGTGGGAATGAGA-AAGGCCCACACGAGCAAAGTATCGGCAGCAGTG 2277 Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344 ||||| ||| |||||| | |||| |||| ||| || | || || | | | Sbjct 2276 CGGAATCTTGGTCAATGGCCGAAAGGCTGAACCAGTCAC----CTAGAAGGACGGATACA 2221 Query 345 TTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCC 404 || | ||||| || | ||||| ||||||||| |||||| | || ||| Sbjct 2220 TTAATTTGATAAAGTCCTAACGGAAAGGAGGATAATGACTGTACTTTCCTATTAA-TCCC 2162 Query 405 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 464 | | || ||||||||||| |||||||||||| |||| ||| |||| | |||| Sbjct 2161 GACCAATCTCGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAA 2102 Query 465 TGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 |||| | |||||||| |||||| || || |||| Sbjct 2101 TGGGTC-TAAAGGGTACGTAGGCTGTATCATAAG 2069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497365820288