Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1315 100 7e-19 >seq1315 Length=3060 Score = 100 bits (110), Expect = 7e-19 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 165 GCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTA 224 ||||||||| | | || ||| |||| ||| || |||| | || ||| || ||| | Sbjct 1967 GCTAGAGTGTAATGGAGGAAAGAGGAACTCCGAGAGTAGGGATGGAATCTGTTGATCCTC 1908 Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAA 283 ||| || | | ||||||||| ||| || ||| | |||||| |||||| ||||| Sbjct 1907 GGAAGACCGCTTAAGGCGAAGGCTTCTTTCTA-ACTAAACACTGACGCTGAGGTACGAAA 1849 Query 284 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 | ||||||||||| |||||||| |||| |||||||| ||||||||||||| Sbjct 1848 GTATGGGGAGCAAAACGGATTAGAGACCCGTGTAGTCCATACCGTAAACGATGA 1795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203011855616