Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq15509 340 3e-91 seq1376 325 7e-87 seq15113 113 9e-23 >seq15509 Length=12340 Score = 340 bits (376), Expect = 3e-91 Identities = 274/332 (83%), Gaps = 23/332 (7%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTT----------------GGC-- 61 || ||||||||||| ||||||||||||| |||| |||| ||| Sbjct 6781 GAACGAGACCTTAATCTGCTAAATAGCCGGGCCAACTTTTTAGTTGGTACTATGGGGCCT 6722 Query 62 ---GGGTCGCCGGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAA 117 || || |||||||||||||| ||||| | | ||| | ||||||||| |||||| Sbjct 6721 TCGGGCTCCCCGGCTTCTTAGAGAGACTACTGAATTCAATTCAGTGGAAGTTTTAGGCAA 6662 Query 118 TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCC 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 6661 TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAAAACC 6602 Query 178 AACGAGTTCATCA-CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTG 236 | |||||| || ||||||||||||||||||||||| ||| | ||| | |||||||||| Sbjct 6601 AGCGAGTTTTACATCCTTGGCCGGAAGGTCTGGGTAAACTTTTGAAATTTTGTCGTGCTG 6542 Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 |||||||| |||||||||||||| ||||||||||||||| |||||||||||| |||||| Sbjct 6541 GGGATAGAACATTGCAATTATTGTTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATC 6482 Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||||||||||||||||||||||||||| Sbjct 6481 AGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 6450 >seq1376 Length=1996 Score = 325 bits (360), Expect = 7e-87 Identities = 233/263 (89%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAG-TTTGAGGCAATAACAGGTCT 127 |||||||||||| ||||||||||| |||||||| ||||| ||| |||||||||||||||| Sbjct 1004 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGGTTTAAGGCAATAACAGGTCT 1063 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||||||||||||||||||||||||||||| | || |||||| | Sbjct 1064 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAATCAGCGAGTTTA 1123 Query 188 TCA-CCTTGGCCGGAAGG-TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | | |||| ||||||||| | ||||||| ||| | ||| | ||||||||||||||||| Sbjct 1124 TTAACCTTAGCCGGAAGGGTTTGGGTAAACTTTTGAAATTTCATCGTGCTGGGGATAGAG 1183 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 ||||| |||||||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 1184 CATTGTAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGT 1243 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||| Sbjct 1244 TGATTACGTCCCTGCCCTTTGTA 1266 >seq15113 Length=1229483 Score = 113 bits (124), Expect = 9e-23 Identities = 76/84 (90%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| ||| ||||||| | | |||| |||||||| ||||||||||||||||| Sbjct 484230 GGCTTCTTAGAGAGACCATCGGCTTCGAACCGAAGGAAGTTTTAGGCAATAACAGGTCTG 484289 Query 129 TGATGCCCTTAGATGTTCTGGGCC 152 ||||||||||||||||||||| || Sbjct 484290 TGATGCCCTTAGATGTTCTGGTCC 484313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947051886336