Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq15509 143 4e-32 seq2836 129 1e-27 seq15377 93.3 7e-17 seq2642 82.4 1e-13 >seq15509 Length=12340 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 2586 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCAGGCCAAA 2529 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2528 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 2471 >seq2836 Length=1950 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||| |||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 402 GTACGAGAGAAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 345 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct 344 GCCGCGAAGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGC 287 >seq15377 Length=116332 Score = 93.3 bits (102), Expect = 7e-17 Identities = 95/119 (80%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGC-AG 59 ||||||||| |||| | ||||||| |||||||| ||||| |||| ||| |||| | Sbjct 83064 GTACGAGAGAAACC-CTTCATTCAGA-TAATTGGTATTTGCAGCTGGTTGAA-AGGCTAA 83008 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| |||| ||||||| |||||| || |||||||| |||| || ||||||||||| Sbjct 83007 TGCCGTGAAGTAACCATCTTCTGGATAATAGCTGAACGTCTCTCAGGTAGAATCCATGC 82949 >seq2642 Length=150333 Score = 82.4 bits (90), Expect = 1e-13 Identities = 96/127 (76%), Gaps = 11/127 (9%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTT------GCGGCTGTCTGA--- 51 |||||| ||||||| | ||||||| |||||||| ||| ||||||| | | Sbjct 99968 GTACGAAAGGAACC-CTTCATTCAGA-TAATTGGTATTTACGGTTGCGGCTGGTTAAAAC 99911 Query 52 CCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAA 111 || || |||||||||||||||||||| ||||| || |||||||||| | |||| |||| Sbjct 99910 CCCAACAATGCCGCGAAGCTACCATCTGTTGGATAATAGCTGAACGCCACCAAGTTAGAA 99851 Query 112 TCCATGC 118 | |||| Sbjct 99850 TGTATGC 99844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819075904768