Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14752 269 2e-67 seq11881 206 2e-48 seq8767 147 2e-30 seq13444 89.7 4e-13 seq802 86.0 5e-12 >seq14752 Length=160396 Score = 269 bits (298), Expect = 2e-67 Identities = 621/919 (68%), Gaps = 31/919 (3%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || |||||||| || ||| | ||||| ||| | || | || |||||| | ||| Sbjct 135105 GAAAATCCTCGCCGATTCTGCCTTTTCCCTATCAAATACCATGAAATTTGGGAGTTTTAC 135164 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || || || |||||||| |||||||| ||||| ||||| ||||| ||||||||||| | Sbjct 135165 AAGAAAGCCGAAGCTTCGTTCTGGACTGTGGAAGAGGTTGATTTATCCAAAGACATACTT 135224 Query 61162 GACTGGGAG----CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTT 61217 || |||||| | | | | || | ||||| || ||||| | ||| || || || Sbjct 135225 GATTGGGAGGAAAAGCTGAACAAG-GATGAACGCCACTTCATCGGCCGTGTATTAGCTTT 135283 Query 61218 CTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTA-TTGGAACGTTTCGCGCAGGAGG 61276 ||||| ||||||| || ||||||||||| |||||| ||| || ||| ||| | || | Sbjct 135284 TTTTGCAACTTCGGATGGCATCGTCAATGAAAATTTAGTTGCAAACTTTTGCG-ATGAAG 135342 Query 61277 TGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACT 61336 | | | ||||| ||||| ||||| || ||||| || ||||| | |||| Sbjct 135343 TTAAGATAGGCGAGGCTAAATGTTTTTACGGTTTTCAGATCATGATTGAGAACATTCACT 135402 Query 61337 CGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT 61396 | || |||||| | | ||||||||||| |||| ||| | | ||| ||| | Sbjct 135403 CTGAAATGTACTCCCTATTGATCGATACGTATATCAAGGATCCCGTTGAAAAGGAATTTT 135462 Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||| |||||||| ||||| || || | ||| || || |||||||| ||||| | Sbjct 135463 TGTTTAATGCCATAGAGACTATTCCTCAAATCAAGACCAAGGCTGATTGGGCTTTCAAAT 135522 Query 61457 GGATC----ACCAGTACAACGGCTACATTT-GGTGAACGATTGCTG-GCATTTGCGGTGG 61510 ||||| || | | |||| | || ||| | | ||| | ||| || ||||| | Sbjct 135523 GGATCGCCAACGAATCCAAC--CAACCTTTCGCCGTACG-TATCTGTGCCTTTGCTATTA 135579 Query 61511 TCGAGGGTGTAT--TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGG 61568 |||| ||||| | |||||| || ||||||||| | ||||||||| | || || ||||| Sbjct 135580 TCGAAGGTGTCTTCTTTTCA--GGCTCGTTTGCCTCTATCTTTTGGCTCAAAAAGCGTGG 135637 Query 61569 ACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTG 61628 | ||||| ||| |||| || ||||||||| || | || || || || | ||| Sbjct 135638 TTTAATGCCTGGTTTGACTCTCTCCAATGAGTTCATTACTCGTGATGAAGGTCTTCATGC 135697 Query 61629 TGATTTT-GCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTG 61687 ||||||| ||||| || ||||| | | | || | |||| || || | || || Sbjct 135698 TGATTTTGGCTGTCTT-TTATTC---CACCACATGATTAATCAACCTTCCCATGAAACTG 135753 Query 61688 TGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747 | | ||||| | ||||| || || || || ||| | | || || |||| Sbjct 135754 TTCTTCAGATTTTGACGGAGGCCGTCGAGATAGAGCAAAGTTTTTTCAAAGAAGCATTGC 135813 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807 |||| | | ||||| |||||| || |||||||| ||||| | ||||||||||| | Sbjct 135814 CCGTTAGATTGATCGGTATGAATGATGAACTAATGTGTCAGTACGTCGAATTTGTTGCTG 135873 Query 61808 ACCGTCTGTTGGTCGATTTGGGTAT---GAAGCGGATCTATAATACGAAAAACCCATTTG 61864 | |||||| |||| | | ||| | |||| ||||||| || || |||| Sbjct 135874 ATCGTCTGATGGTTTCTCTTGGTTTCCCCAAGC---ACTATAATGTTTCTAATCCCTTTG 135930 Query 61865 ATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCG 61924 |||| ||||| ||||||| || | || ||||| || || || || || ||||| | Sbjct 135931 ATTTTATGGATTTGATTTCCCTTCAAGGAAAGACAAACTTCTTTGAAAAGCGTGTTTCTG 135990 Query 61925 ACTATCAACGTTTGGGTGT 61943 | || |||||| ||||| Sbjct 135991 ATTACCAACGTGCTGGTGT 136009 Score = 156 bits (172), Expect = 3e-33 Identities = 368/546 (67%), Gaps = 10/546 (2%) Strand=Plus/Plus Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158 || ||||| || ||||| || |||||||| | ||||| || ||| |||| || ||| || Sbjct 137232 TATAAAAAAGCTGAAGCCTCTTTCTGGACAGCCGAGGAAGTTGATCTGTCAAAGGACTTG 137291 Query 61159 AATGACTGGGAGCGTTTATCGAGCGGTGAACA-ACATT--TCATTAAACATGTGTTGGCG 61215 | |||||||||| | | | ||| | | ||| | ||| | ||||||||| Sbjct 137292 ATTGACTGGGAGGAAAAACTAAATGATGATGAGAGATTCTTTATTTCTCGTGTGTTGGCC 137351 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCAGGA 61274 |||||||| |||| || ||||| |||||||||||| | || || ||| ||| | || Sbjct 137352 TTCTTTGCTACTTCTGATGGTATTGTCAATGAGAATCTGGTGAAAAACTTCTGCG-ATGA 137410 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 || | || | ||||| || |||||||| || ||||| || ||||| | || Sbjct 137411 AGTCAAGGTAGCCGAGGCAAAGTGCTTCTACGGTTTTCAGATCATGATTGAGAACATTCA 137470 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 ||| || |||||| | | |||||||| ||||| | || || ||| Sbjct 137471 CTCTGAAATGTACTCGCTATTGATCGATACTTACATTAAAGATTCTATTGAGAAAGAATT 137530 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 || || ||||||||||| || || || | | ||| || || | ||||| ||||| Sbjct 137531 CTTATTTAATGCCATCGAAACCATTCCTGTCATTAAGGATAAGGCTAACTGGGCTTTCAA 137590 Query 61455 TTGGATCACCAGTACAACGG--CTACATTT-GGTGAACG-ATTGCTGGCATTTGCGGTGG 61510 |||||| | | | | | | || ||| |||| || |||| || | ||||| | | Sbjct 137591 ATGGATCTCTAATGAATCAAACCAACCTTTTGGTGTCCGTATTGTTG-CTTTTGCTGCTG 137649 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 | |||||| | || || ||||||||||||| | ||||||||| | ||||| ||||| Sbjct 137650 TGGAGGGTATCTTCTTTTCTGGATCGTTTGCCTCTATCTTTTGGCTCAAGAAGCGTGGTT 137709 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||| ||| |||| | ||||| || || | || || || ||| | ||| || Sbjct 137710 TAATGCCTGGTTTGACTCTTTCTAATGAATTCATTACTCGTGATGAAGGCCTACATGCTG 137769 Query 61631 ATTTTG 61636 |||||| Sbjct 137770 ATTTTG 137775 >seq11881 Length=132943 Score = 206 bits (228), Expect = 2e-48 Identities = 435/641 (68%), Gaps = 12/641 (2%) Strand=Plus/Minus Query 61297 TGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTC 61356 |||||||| || ||||| || ||||| || || | || | |||| |||||| || | Sbjct 45174 TGTTTCTATGGTTTCCAAATCGCCATTGAAAACATTCATGCTGAGACATACAGTCTTTTG 45115 Query 61357 ATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT--TGTTCAATGCCATCGAGA 61414 || || || || |||| ||| | || ||| || ||| | || | ||||| || | Sbjct 45114 ATTGACACTTATATCAAGGATAGCGCTGAAAAGGA--GATGCTCTTTGACGCCATTGAAA 45057 Query 61415 CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGG 61474 | || || | ||| | || || || ||||||||||| |||||| | | ||| | Sbjct 45056 CCATCCCCTGTATCAAGAGAAAGGCTGACTGGGCCTTCAAATGGATCTCTGG--CAATGA 44999 Query 61475 CTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGAT 61534 | | |||| |||| |||| | || ||||| | ||||| ||| | || ||| || | Sbjct 44998 TT-CTTTTGCTGAAAGATTAGTTGCTTTTGCTGCCGTCGAAGGTATCTTCTTCTCAGGCT 44940 Query 61535 CGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCA 61594 | |||||| | || || ||| | ||||| || || || ||||| || ||||||| | Sbjct 44939 CATTTGCCTCCATTTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGGTTGACCTTTTCTA 44880 Query 61595 ATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC 61654 |||| ||||| || || ||||||||| | ||| || ||||| | | | || | | Sbjct 44879 ATGAATTGATCTCTCGTGACGAGGGCCTTCATACCGACTTTGCCTGTCTCTTGTTTACCC 44820 Query 61655 GCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTA 61713 ||||| ||| || || | |||||||| ||| | ||| ||||| || Sbjct 44819 ---ATCTGAAGAAAACCCCCTCCCAAGAGCGTGTAAA-GAGCATCATCGCAGAGGCTGTT 44764 Query 61714 ACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGT 61773 || || || ||||| |||||||||||||||| || || || |||||||| Sbjct 44763 GAAATTGAGCAAGAATTCTTGACTGACGCTTTGCCTGTTAATCTTATTGGCATGAACGCC 44704 Query 61774 GGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATG 61833 || |||| || || |||||||||||||| ||| | || |||||| | || | Sbjct 44703 AACCTCATGTGCCAATACATTGAATTTGTTGCTGACAGACTCATGGTCGCCCTCGGCTTC 44644 Query 61834 AAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGC 61893 | || || ||| | ||||| |||||||||||||||||||||||||| | || Sbjct 44643 GATAAAATTTACAATGCCTCTAACCCCTTTGATTTCATGGACATGATTTCGCTTCAAGGA 44584 Query 61894 AAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACG 61934 ||||| ||||| || ||||||||||| ||||||||||| Sbjct 44583 AAGACCAATTTCTTTGAGAAACGTGTCTCTGACTATCAACG 44543 >seq8767 Length=28599 Score = 147 bits (162), Expect = 2e-30 Identities = 410/629 (65%), Gaps = 0/629 (0%) Strand=Plus/Minus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 |||||||| | || ||||| ||||| | || || ||| | ||||||||||| || Sbjct 16619 GCAAGAGAACCAAGATTGCAAACAGCGACTTCATCGGGACTAGAGTACTCGACAATCTCA 16560 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 || |||| ||||| || ||||| ||||| ||||| || || |||||||| ||||| Sbjct 16559 GTACACAAGTTACTACATTTGATGGTACCCAAGTTCTGCTGGTTGCTCTTGCGGTTGCAA 16500 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 || || ||||| | | | ||| | || || || ||| | ||| |||||||| | Sbjct 16499 GCGTCTTTGTAGAGTAAAAAAGGATTCCCAGTTTCCGTTTGAGCCTCCATGATGGCAAAC 16440 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAG 66247 ||||| | || || || || ||||| ||| || | ||| | Sbjct 16439 CAAAGTTTTTGAGCAGGCATGGTTTCGCGAGCAAGACCTTGCTTTTCATACTTTTCAAAA 16380 Query 66248 AGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATC 66307 || ||| || || ||||| || | | | || || | | ||||| | Sbjct 16379 AGAGCTTCAAATTCATCGCCCCAAACATTACATAAACCGGGTGCTTCATTAGGACAGAAG 16320 Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367 |||||||| | ||||| | ||| || || ||| || |||||||| ||||| || || Sbjct 16319 AGCGACCATTGACCATTTTCTTCAACCCGCTTCATGAAAAGATCAGGGATCCACAGAGCA 16260 Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427 ||||| | || | ||||| || ||| ||| ||||||||| | || |||||| Sbjct 16259 TAGAACATGTCCCTTGCTCTAATTTCATCACGGCCAAAATTTTTGCGAAGATCCAGGAAC 16200 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 ||| | ||||||||||| || || ||||| || || || | ||| ||| || | Sbjct 16199 ATAAATACATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAGGCGCCAGGACGCTTATTG 16140 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 |||||||| || ||||||||||| | |||| ||||| | ||| |||| | || Sbjct 16139 CCACCTTGATCCACGTAGCGAGCAGTACTGTTAAAGACCTTGAGCATGGGTAATAAACCA 16080 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTC 66607 | || || ||||| | ||| | ||| || | || || || | || || || Sbjct 16079 TGAGCTTCACCATTAGACCCGGCAATGTATGAATCAGTAGCACGGATGTTATGGACGTTT 16020 Query 66608 AGACCAATACCACCGGCCGTCTTCGAGAT 66636 | |||||||||||| || |||| ||||| Sbjct 16019 AAACCAATACCACCAGCGCTCTTTGAGAT 15991 >seq13444 Length=200645 Score = 89.7 bits (98), Expect = 4e-13 Identities = 172/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAG-AGATCGCGTGCTCGTTGCTCCTCAA 66398 |||||| | || || |||||||| | ||||| || | ||| || || | | ||| Sbjct 117585 CATAAAGATGTCCGGGATCCAGAGTCCA-AGAAGGAGGTGGCGAGCACGGAGATTCTCTT 117527 Query 66399 TGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGG 66457 ||| | | |||||| || ||||| ||||||||||||||||| |||||||| || || Sbjct 117526 CGCCCGAGTTTTTTGA-CAGGTCGATAAACTCAAAGATGTCGGCGTGCCATGGCTCGAGA 117468 Query 66458 TAGATGGCGAACGAGCCCAT-ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATT 66516 |||| || ||| ||| | || ||| | | || || || | ||||||| ||| Sbjct 117467 TAGACAGCATACGTACCCTTGACCTTTTTAG-CGCCGGGGGTGATGAAGCGAGCAGCATC 117409 Query 66517 GTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGG 66576 ||| || ||||||| ||| || | || ||||| || |||| || |||||| | ||| Sbjct 117408 GTTAAACACACGCAGCATGGGGATGATACCGTTCGAGGTGCCGTTCGTGCCGGCAATGTA 117349 Query 66577 GGATCC 66582 ||| || Sbjct 117348 GGAGCC 117343 >seq802 Length=2293163 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||||||||| || ||||| || || || || || ||||| | ||||||||||| ||| Sbjct 2025977 ACAAACTTGGGCAGAGCAAGCGAAGCCAGATTACAAACAGCCACCTCGTCAGGAGATGTA 2026036 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 || || | || || || ||||| || || |||||||||| ||||| |||||| Sbjct 2026037 TATTCAATGATCTCTGTACACAGGTTGGATGAGGAGATGGTGCCCAGATTCTTTTGATTT 2026096 Query 66113 CTCTTGCGATTGCATGCATC 66132 ||| |||||| ||||| Sbjct 2026097 GACTTTTCATTGCAGGCATC 2026116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397492233105680