Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq14545 102 3e-16 seq8374 87.8 7e-12 >seq14545 Length=189444 Score = 102 bits (112), Expect = 3e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 12731 AGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAA 12790 || |||||||||||| ||||| ||||||| | | || || || ||||| | ||||| Sbjct 55122 AGCACATCGTAAAAGTAAACTGTCATGCCCATAGCTTCAGCCAGCACAGATAGCTGAGCG 55063 Query 12791 CCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGA 12850 || || | |||||| || || ||||| | || || | || ||| ||| ||| | Sbjct 55062 CCGATATGACCATACCCAACAATACCCAAAACTTTGCCGCGAATCTCATAGCATGCTTTA 55003 Query 12851 GAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAA 12910 ||| ||||||||||| |||||| || | |||| |||| | ||| || | ||| |||| Sbjct 55002 GAAACCTTGTTCCAAACGCCTTGATGCATTTCTATGTTACGATCGCCCAGCTGGCGAGCG 54943 Query 12911 AGATTAATTAGTTGTCCTATGATGAGCTCTGCCACG 12946 || |||| | || || || | ||||| || ||| Sbjct 54942 AGCATAATAATTTCGCCAATAACAAGCTCAGCGACG 54907 >seq8374 Length=42181 Score = 87.8 bits (96), Expect = 7e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 ||||| ||||||||||| ||||| | | | ||||||||||||| ||| ||| ||||| Sbjct 10704 CCAATTGTCATACGAGACGGAATAGCGTGCGGGTTGATGATGAGGTCGGGCGTGATGCCC 10763 Query 364484 TCAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || | || || | || || | || || | | | | |||||| || |||||||| | Sbjct 10764 TCGGCCGAGAACGGGAAATCCTCCTGGCGGTA-GGTCATACCAATCGTGCCCTTTTGGCC 10822 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || |||||||||||||| || Sbjct 10823 GTGACGCGAGGCAAACTTGTCGCCCAT 10849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884508764776841