Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pecoramyces_20ruminatium_20[genbank_20GCA_5F000412615.1_202013-06- 19] 32,574 sequences; 100,954,185 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq8515 77.0 1e-11 >seq8515 Length=1952 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| |||||||||||||| || | | ||| || |||||||||| || Sbjct 267 CGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCAC-CACCAGGAGTGGAGCATGCGG 325 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||||| || |||| || ||| ||||||| || ||||| Sbjct 326 CTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACAT 368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503510087040