Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq188 423 3e-116 seq153 423 3e-116 seq8 423 3e-116 >seq188 Length=323665 Score = 423 bits (468), Expect = 3e-116 Identities = 272/296 (92%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 321317 TACTAAATTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 321376 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 321377 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTTAAG 321436 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 321437 AATTCTGCTTCTTAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 321496 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 321497 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCC 321556 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 321557 TGAAATTTCCAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 321612 >seq153 Length=677625 Score = 423 bits (468), Expect = 3e-116 Identities = 272/296 (92%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 4641 TACTAAATTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 4582 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 4581 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTTAAG 4522 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4521 AATTCTGCTTCTTAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 4462 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 4461 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCC 4402 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 4401 TGAAATTTCCAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 4346 Score = 423 bits (468), Expect = 3e-116 Identities = 272/296 (92%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 13175 TACTAAATTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 13116 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 13115 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTTAAG 13056 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13055 AATTCTGCTTCTTAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 12996 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 12995 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCC 12936 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 12935 TGAAATTTCCAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 12880 Score = 423 bits (468), Expect = 3e-116 Identities = 272/296 (92%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 21709 TACTAAATTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 21650 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 21649 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTTAAG 21590 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21589 AATTCTGCTTCTTAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 21530 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 21529 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCC 21470 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 21469 TGAAATTTCCAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 21414 >seq8 Length=53689 Score = 423 bits (468), Expect = 3e-116 Identities = 272/296 (92%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 53122 TACTAAATTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 53181 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 53182 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTTAAG 53241 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 53242 AATTCTGCTTCTTAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 53301 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 53302 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCC 53361 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 53362 TGAAATTTCCAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 53417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398017792