Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq188 764 0.0 seq153 764 0.0 seq8 286 1e-74 seq222 178 4e-42 seq1 131 5e-28 seq164 87.8 6e-15 >seq188 Length=323665 Score = 764 bits (846), Expect = 0.0 Identities = 494/538 (92%), Gaps = 5/538 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 321644 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGGACACCTGCGTTATT 321703 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 321704 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAACTGGATC 321763 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || ||| |||||||||| ||||| ||| | |||||| ||| |||| | | ||||| Sbjct 321764 AGTTCGTAAAGAACCTTAACGCTAGAAAGTGGACCGTGAAGTCCAATTCCACATTATTGA 321823 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| Sbjct 321824 ATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCACTTA 321880 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 | ||||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 321881 TGCTACACCCTCT-AAGTTCTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 321939 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 321940 CTTTCCCCGCTGATTATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 321999 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322000 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 322059 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322060 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 322119 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 322120 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 322177 >seq153 Length=677625 Score = 764 bits (846), Expect = 0.0 Identities = 494/538 (92%), Gaps = 5/538 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 4314 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGGACACCTGCGTTATT 4255 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 4254 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAACTGGATC 4195 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || ||| |||||||||| ||||| ||| | |||||| ||| |||| | | ||||| Sbjct 4194 AGTTCGTAAAGAACCTTAACGCTAGAAAGTGGACCGTGAAGTCCAATTCCACATTATTGA 4135 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| Sbjct 4134 ATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCACTTA 4078 Query 247 TTCTACACCTCTC-AAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 | ||||||| ||| |||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 4077 TGCTACACC-CTCTAAGTTCTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 4019 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 4018 CTTTCCCCGCTGATTATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 3959 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3958 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 3899 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3898 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 3839 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3838 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 3781 Score = 764 bits (846), Expect = 0.0 Identities = 494/538 (92%), Gaps = 5/538 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 12848 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGGACACCTGCGTTATT 12789 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 12788 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAACTGGATC 12729 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || ||| |||||||||| ||||| ||| | |||||| ||| |||| | | ||||| Sbjct 12728 AGTTCGTAAAGAACCTTAACGCTAGAAAGTGGACCGTGAAGTCCAATTCCACATTATTGA 12669 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| Sbjct 12668 ATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCACTTA 12612 Query 247 TTCTACACCTCTC-AAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 | ||||||| ||| |||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 12611 TGCTACACC-CTCTAAGTTCTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 12553 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 12552 CTTTCCCCGCTGATTATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 12493 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12492 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 12433 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12432 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 12373 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 12372 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 12315 Score = 764 bits (846), Expect = 0.0 Identities = 494/538 (92%), Gaps = 5/538 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 21382 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGGACACCTGCGTTATT 21323 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 21322 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAACTGGATC 21263 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || ||| |||||||||| ||||| ||| | |||||| ||| |||| | | ||||| Sbjct 21262 AGTTCGTAAAGAACCTTAACGCTAGAAAGTGGACCGTGAAGTCCAATTCCACATTATTGA 21203 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| Sbjct 21202 ATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCACTTA 21146 Query 247 TTCTACACCTCTC-AAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 | ||||||| ||| |||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 21145 TGCTACACC-CTCTAAGTTCTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 21087 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 21086 CTTTCCCCGCTGATTATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 21027 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21026 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 20967 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20966 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 20907 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 20906 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 20849 >seq8 Length=53689 Score = 286 bits (316), Expect = 1e-74 Identities = 210/244 (86%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 53449 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGGACACCTGCGTTATT 53508 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 53509 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAACTGGATC 53568 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || ||| |||||||||| ||||| ||| | |||||| ||| |||| | | ||||| Sbjct 53569 AGTTCGTAAAGAACCTTAACGCTAGAAAGTGGACCGTGAAGTCCAATTCCACATTATTGA 53628 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| Sbjct 53629 ATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCACTTA 53685 Query 247 TTCT 250 | || Sbjct 53686 TGCT 53689 >seq222 Length=1205781 Score = 178 bits (196), Expect = 4e-42 Identities = 139/169 (82%), Gaps = 23/169 (14%) Strand=Plus/Minus Query 383 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAG--- 439 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 467550 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 467491 Query 440 ----AGAGTCATA-GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||| ||| |||| |||||||||||||||||| |||| Sbjct 467490 GAAGAGAGTCATAGGTTGCTCC---------------CTTGGTTGAATTTCTTCATTTTG 467446 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 | |||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct 467445 ATATTCAGAGCAGTGGGCAGAAATCACATTATGTCAATATCACTTTCTG 467397 >seq1 Length=2625575 Score = 131 bits (144), Expect = 5e-28 Identities = 88/97 (91%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 254 CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313 ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1909128 CCTCT-AAGTTCTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 1909070 Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||| ||||||| |||||||||||||||||||| Sbjct 1909069 GCTGATTATGCCAAGCTCGTTCCCTTGGCTGTGGTTT 1909033 >seq164 Length=541120 Score = 87.8 bits (96), Expect = 6e-15 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 24 ATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCG 83 ||||||||||| ||||||| |||||||| ||| || | ||| |||||||||||||||| Sbjct 342366 ATTTCTGTTCTTCATGAGTTCCCCTTAGAACAACTACAATATTTTTTAACAGATGTGCCG 342307 Query 84 CCCCAGCCAAACT 96 | ||||||||||| Sbjct 342306 CTCCAGCCAAACT 342294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635196206336