Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq170 104 7e-18 >seq170 Length=483118 Score = 104 bits (114), Expect = 7e-18 Identities = 204/299 (68%), Gaps = 22/299 (7%) Strand=Plus/Minus Query 1957 CTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTATTCTTGGTGTGTCTATC 2016 |||||||||||||||||||| | || || ||||| ||||| || |||||||| || | Sbjct 247706 CTTGACGGTACTCCAAACAAGAGCAAGCTCGGTGCTAACGCCATCCTTGGTGTTTCCCTT 247647 Query 2017 GCTGTAGCACGCGCAG---CTGCTGACTACCTTGAAGTTCCACTTTACAGCTACCTTGGC 2073 ||||| || || || | |||||||| | | |||||||||||||| || | || Sbjct 247646 GCTGTTGCCCGTGCTGGTGCTGCTGACAAGC---AAGTTCCACTTTACCAACACTTAGGT 247590 Query 2074 GGATTCAACACTA--AAG----------TTCTTCCAACTCCAATGATGAACATCATCAAC 2121 | ||| | || ||| |||||||| |||| |||||| || | ||| Sbjct 247589 GAATTAGCCGGTAACAAGGGTCCATGGATTCTTCCAGTTCCATCCATGAACGTCCTTAAC 247530 Query 2122 GGTGGTTCTCACTCAGACGCTCCAA--TCGCTTTCCAAGAATTTATGATTGTACCTGCTG 2179 |||||||| ||| | | | ||| |||| | |||||||| |||||| | || ||| Sbjct 247529 GGTGGTTCCCACGCCG--GTAACAAGCTCGCCATGCAAGAATTCATGATTCTTCCAACTG 247472 Query 2180 GTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGAAATCTTCCACGCGCTTAAG 2238 |||| | |||| ||||| ||| |||| ||||| | | |||| | |||||| Sbjct 247471 GTGCTAGCTCCTTCACTGAAGCTCTTAAGATGGGTTCTGAAGTTTACCACTCTCTTAAG 247413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156037970114208