Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq197 161 2e-37 seq1018 73.4 7e-11 >seq197 Length=115927 Score = 161 bits (178), Expect = 2e-37 Identities = 185/248 (75%), Gaps = 28/248 (11%) Strand=Plus/Minus Query 44 CTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTT------TGAAAAAATTA-GAGTG 96 ||| | || |||| | || || | | ||||||||||| | ||||||||| ||||| Sbjct 54370 CTTTATTGTGTGTCCTGGCGATCTAAGACTTTTACTTAAAATTTTAAAAAATTAAGAGTG 54311 Query 97 TTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 || ||| | ||||||||||| |||||||||||||||||||| || |||| Sbjct 54310 TTA----------TTT--TTGAATACATTAGTATGGAATAATAGAATAGGACTTG-GGTT 54264 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||| ||||||| || ||||||||||||||||| || | | ||| Sbjct 54263 CTATTTTGTTGATTTCTAG--------TAGTGATTAATAGGGATAGTTGGAGACATTAGT 54212 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 || ||||||||||||||||||| | ||||||| |||||||||| ||||||||| || Sbjct 54211 GTTTAATTGTCAGAGGTGAAATTTCTTGATTTATGAAAGACTAACTTTTGCGAAAGCATT 54152 Query 277 CACCAAGG 284 ||||| Sbjct 54151 TGTCAAGG 54144 >seq1018 Length=4602 Score = 73.4 bits (80), Expect = 7e-11 Identities = 89/117 (76%), Gaps = 12/117 (10%) Strand=Plus/Minus Query 153 GGTTCTATTTTGTTGGTTTC-TAGGACCGCCGTAATGATTA-ATAGGGAT-AGTCGGG-- 207 |||| ||||||||||||||| | ||| |||||||||| |||||||| ||| ||| Sbjct 3845 GGTTTTATTTTGTTGGTTTCTTTGGATGAAAGTAATGATTACATAGGGATAAGTTGGGGA 3786 Query 208 ------GGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT-ATTGAAGAC 257 ||| | ||||| |||||| ||||||| ||||||| ||||| |||||| || Sbjct 3785 GGAAAAGGTATTTGTATTTAATTGTTAGAGGTGGAATTCTTAGATTTAATTGAACAC 3729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915184844288