Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq197 145 2e-32 >seq197 Length=115927 Score = 145 bits (160), Expect = 2e-32 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 4 CTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCC 63 |||||||||||||||| || ||| | ||| | || |||||| ||| ||||| |||| Sbjct 54570 CTCATTCCAATTACAAAACAATAAAAACCCC-GAATTGTTATTTAATGTTACTACTTCCC 54628 Query 64 CGTGTCGGGATTGGGTAATTTGCGCGCCTGC-TGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||||| ||||||||||||||| | | ||| |||||||||| ||| ||||||| ||||| Sbjct 54629 TGTGTCTGGATTGGGTAATTTGTGGGTATGCTTGCCTTCCTTAGATATGGTAGCTGTTTC 54688 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||||| |||||||| ||| |||| |||||| | ||| | ||| | ||||| ||||| Sbjct 54689 TCAGGTACCCTCTCCATAATTGAACTCTAATTTTACTTTATCTGTTAAAACCATAGTAGG 54748 Query 183 CCACTATCCTACCATCGAA 201 | |||| | | ||||| Sbjct 54749 TCTATATCATTCTTTCGAA 54767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510374987776