Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq384 154 8e-36 seq296 154 8e-36 seq249 154 8e-36 seq217 154 8e-36 seq196 154 8e-36 seq192 150 1e-34 seq46 149 3e-34 seq8 138 6e-31 >seq384 Length=322593 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 322370 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 322314 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 322313 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 322258 >seq296 Length=25628 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 2996 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 3052 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 3053 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 3108 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 15815 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 15871 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 15872 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 15927 >seq249 Length=33337 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 7928 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 7984 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 7985 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 8040 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 20697 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 20753 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 20754 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 20809 >seq217 Length=38196 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 10593 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 10649 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 10650 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 10705 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 23325 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 23381 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 23382 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 23437 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 36057 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 36113 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 36114 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 36169 >seq196 Length=43491 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 4145 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 4089 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 4088 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 4033 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 16528 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 16472 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 16471 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 16416 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 28909 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 28853 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 28852 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 28797 Score = 154 bits (170), Expect = 8e-36 Identities = 105/116 (91%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 41672 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 41616 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 41615 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 41560 >seq192 Length=44177 Score = 150 bits (166), Expect = 1e-34 Identities = 104/116 (90%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 13487 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 13543 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||| |||||||||||||| | |||||||||||||||||||| ||||||| Sbjct 13544 ATCCCTAGTCAGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTTCGA 13599 >seq46 Length=651723 Score = 149 bits (164), Expect = 3e-34 Identities = 102/113 (90%), Gaps = 4/113 (4%) Strand=Plus/Minus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 ||||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 639863 ACCCAAAGACTTTGATTTCTCATAAGGTGCCGAGCGTGTCA---TGAAATACAACGCCCG 639807 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||||||||||||||||||||| | |||||||||||||||||||| |||| Sbjct 639806 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTT 639754 >seq8 Length=144519 Score = 138 bits (152), Expect = 6e-31 Identities = 101/113 (89%), Gaps = 6/113 (5%) Strand=Plus/Minus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCCCG 61 |||||||||||||||||||| |||||||||||||| |||| ||| | ||| |||||| Sbjct 143234 ACCCAAAGACTTTGATTTCTA-TAAGGTGCCGAGCG-GTCA---TGAAATACAACGCCCG 143180 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||||||||||||||||||||| | |||||||||||||||||||| |||| Sbjct 143179 ATCCCTAGTCGGCATAGTTTACGGTCAGGACTACGACGGTATCTGATCATCTT 143127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398859430