Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq296 107 1e-21 seq249 107 1e-21 seq217 107 1e-21 seq196 107 1e-21 seq46 107 1e-21 seq8 87.8 1e-15 >seq296 Length=25628 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 2422 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 2479 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 2480 GACGTAAT-CAACGCAAGCT 2498 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 15241 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 15298 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 15299 GACGTAAT-CAACGCAAGCT 15317 >seq249 Length=33337 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 7354 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 7411 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 7412 GACGTAAT-CAACGCAAGCT 7430 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 20123 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 20180 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 20181 GACGTAAT-CAACGCAAGCT 20199 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 32876 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 32933 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 32934 GACGTAAT-CAACGCAAGCT 32952 >seq217 Length=38196 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 10019 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 10076 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 10077 GACGTAAT-CAACGCAAGCT 10095 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 22751 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 22808 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 22809 GACGTAAT-CAACGCAAGCT 22827 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 35483 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 35540 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 35541 GACGTAAT-CAACGCAAGCT 35559 >seq196 Length=43491 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 4719 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 4662 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 4661 GACGTAAT-CAACGCAAGCT 4643 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 17102 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 17045 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 17044 GACGTAAT-CAACGCAAGCT 17026 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 29483 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 29426 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 29425 GACGTAAT-CAACGCAAGCT 29407 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 42246 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 42189 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 42188 GACGTAAT-CAACGCAAGCT 42170 >seq46 Length=651723 Score = 107 bits (118), Expect = 1e-21 Identities = 74/80 (93%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 640437 AGGTCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 640380 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 640379 GACGTAAT-CAACGCAAGCT 640361 >seq8 Length=144519 Score = 87.8 bits (96), Expect = 1e-15 Identities = 71/80 (89%), Gaps = 6/80 (8%) Strand=Plus/Minus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||||| ||||| |||||||| ||||||||||| | |||||||||||||| Sbjct 143799 AGGTCTCACTAAGCA--TTCAT-CGGTAGTA-GCGACGGGCGGTG-GTACAAAGGGCAGG 143745 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||||||||| Sbjct 143744 GACGTAAT-CAACGCAAGCT 143726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798767660