Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq384 122 1e-25 seq296 122 1e-25 seq249 122 1e-25 seq217 122 1e-25 seq196 122 1e-25 seq192 122 1e-25 seq46 122 1e-25 seq8 118 1e-24 >seq384 Length=322593 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 322114 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 322056 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 322055 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 322002 >seq296 Length=25628 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 3252 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 3310 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 3311 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 3364 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 16071 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 16129 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 16130 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 16183 >seq249 Length=33337 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 8184 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 8242 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 8243 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 8296 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 20953 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 21011 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 21012 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 21065 >seq217 Length=38196 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 10849 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 10907 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 10908 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 10961 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 23581 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 23639 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 23640 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 23693 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 36313 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 36371 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 36372 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 36425 >seq196 Length=43491 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 3889 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 3831 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 3830 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 3777 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 16272 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 16214 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 16213 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 16160 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 28653 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 28595 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 28594 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 28541 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 41416 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 41358 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 41357 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 41304 >seq192 Length=44177 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 13743 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 13801 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 13802 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 13855 >seq46 Length=651723 Score = 122 bits (134), Expect = 1e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 633808 CTAGAAACCAACAAAATAAA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATACA 633750 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 633749 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 633696 >seq8 Length=144519 Score = 118 bits (130), Expect = 1e-24 Identities = 96/114 (84%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| || | |||||||||||||||||||||||||||||| | Sbjct 137299 CTAGAAACCAACAAAATAAA-ACAAA-GTCCTATTCTATTATTCCATGCTAATGTATACA 137242 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || ||||||||| |||||||||||||| |||| |||| || | |||||| Sbjct 137241 AGCTTACGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAATAGCCACGGTTCC 137188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197480258