Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq384 201 1e-49 seq296 201 1e-49 seq249 201 1e-49 seq217 201 1e-49 seq196 201 1e-49 seq192 201 1e-49 seq46 201 1e-49 seq8 185 9e-45 >seq384 Length=322593 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 322002 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 322061 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 322062 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 322119 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 322120 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 322179 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 322180 TTGGATTTAT 322189 >seq296 Length=25628 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 3364 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 3305 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 3304 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 3247 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 3246 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 3187 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 3186 TTGGATTTAT 3177 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 16183 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 16124 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 16123 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 16066 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 16065 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 16006 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 16005 TTGGATTTAT 15996 >seq249 Length=33337 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 8296 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 8237 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 8236 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 8179 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 8178 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 8119 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 8118 TTGGATTTAT 8109 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 21065 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 21006 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 21005 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 20948 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 20947 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 20888 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 20887 TTGGATTTAT 20878 >seq217 Length=38196 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 10961 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 10902 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 10901 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 10844 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 10843 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 10784 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 10783 TTGGATTTAT 10774 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 23693 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 23634 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 23633 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 23576 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 23575 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 23516 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 23515 TTGGATTTAT 23506 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 36425 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 36366 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 36365 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 36308 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 36307 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 36248 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 36247 TTGGATTTAT 36238 >seq196 Length=43491 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 3777 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 3836 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 3837 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 3894 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 3895 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 3954 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 3955 TTGGATTTAT 3964 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 16160 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 16219 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 16220 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 16277 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 16278 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 16337 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 16338 TTGGATTTAT 16347 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 28541 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 28600 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 28601 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 28658 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 28659 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 28718 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 28719 TTGGATTTAT 28728 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 41304 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 41363 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 41364 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 41421 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 41422 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 41481 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 41482 TTGGATTTAT 41491 >seq192 Length=44177 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 13855 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 13796 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 13795 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 13738 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 13737 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 13678 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 13677 TTGGATTTAT 13668 >seq46 Length=651723 Score = 201 bits (222), Expect = 1e-49 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 633696 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 633755 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | |||| |||||||| |||||||||| ||| Sbjct 633756 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTTTATTTTGTTGGTTTCTAGGGCCG- 633813 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| ||| |||| ||||||||||| Sbjct 633814 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 633873 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 633874 TTGGATTTAT 633883 >seq8 Length=144519 Score = 185 bits (204), Expect = 9e-45 Identities = 158/190 (83%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||| | || |||||||||||||||||||| ||| ||||||||| | ||| | ||| Sbjct 137188 GGAACCGTGGCTATTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCGTAAGCTTGTATA 137247 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | ||| |||||||| |||||||||| ||| Sbjct 137248 CATTAGCATGGAATAATAGAATAGGACTT--TGTTTTATTTTGTTGGTTTCTAGGGCCG- 137304 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| |||| | |||||| ||| |||| ||||||||||| Sbjct 137305 AAGTAATGATTAATA-GGATAGT-TGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTC 137362 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 137363 TTGGATTTAT 137372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997832480