Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq296 125 1e-26 seq249 125 1e-26 seq217 125 1e-26 seq196 125 1e-26 seq179 125 1e-26 >seq296 Length=25628 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 10584 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 10527 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 10526 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 10467 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 10466 GAATGTGATGATT 10454 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 23390 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 23333 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 23332 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 23273 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 23272 GAATGTGATGATT 23260 >seq249 Length=33337 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 2695 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 2638 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 2637 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 2578 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 2577 GAATGTGATGATT 2565 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 15464 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 15407 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 15406 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 15347 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 15346 GAATGTGATGATT 15334 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 28218 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 28161 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 28160 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 28101 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 28100 GAATGTGATGATT 28088 >seq217 Length=38196 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 5359 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 5302 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 5301 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 5242 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 5241 GAATGTGATGATT 5229 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 18091 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 18034 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 18033 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 17974 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 17973 GAATGTGATGATT 17961 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 30823 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 30766 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 30765 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 30706 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 30705 GAATGTGATGATT 30693 >seq196 Length=43491 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 9377 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 9434 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 9435 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 9494 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 9495 GAATGTGATGATT 9507 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 21760 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 21817 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 21818 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 21877 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 21878 GAATGTGATGATT 21890 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 34136 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 34193 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 34194 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 34253 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 34254 GAATGTGATGATT 34266 >seq179 Length=512839 Score = 125 bits (138), Expect = 1e-26 Identities = 109/133 (82%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | ||| ||||||||||||| | ||||| || ||| Sbjct 510931 GTACGAGAGGAACCGTATA-TTC-GCATACTTGGTTTTTGCGGTTATCTGAAAAGATAGT 510988 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||| Sbjct 510989 GCCGCGAAGCTACCATGCGTAGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCTG 511048 Query 121 GAACGGGGTGATT 133 ||| | | ||||| Sbjct 511049 GAATGTGATGATT 511061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196531968