Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3623 462 4e-128 seq2523 462 4e-128 seq1807 462 4e-128 seq779 462 4e-128 seq2756 291 1e-76 >seq3623 Length=2819 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 1878 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 1937 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1938 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 1997 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1998 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 2057 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2058 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 2117 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2118 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 2173 >seq2523 Length=5993 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 2135 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 2076 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2075 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 2016 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2015 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1956 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1955 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 1896 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1895 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1840 >seq1807 Length=19749 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 942 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 883 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 882 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 823 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 822 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 763 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 762 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 703 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 702 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 647 >seq779 Length=47677 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 942 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 883 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 882 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 823 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 822 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 763 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 762 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 703 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 702 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 647 >seq2756 Length=10097 Score = 291 bits (322), Expect = 1e-76 Identities = 189/206 (92%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 8826 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 8768 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 8767 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 8708 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8707 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 8648 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||| Sbjct 8647 GAACGCTTGGCTGCCACAAGCCAGTT 8622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854304341376