Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq861 136 5e-30 seq649 136 5e-30 seq584 136 5e-30 seq2756 75.2 1e-11 >seq861 Length=32788 Score = 136 bits (150), Expect = 5e-30 Identities = 108/127 (85%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| | || |||||||||| |||||||||||||||||||||| Sbjct 31641 CTAGAAACCAACAAAATAAGATCGAACGTCCTATTTCATTATTCCATGCTAATGTATTCA 31582 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 |||| ||| |||||| |||||||||||||| |||| |||| ||||| |||| |||| Sbjct 31581 AGCGTTAGCTTGCTTTAAACACTCTAATTTTTTCAAAGTAACAGTCCAAATTCC-CCGCA 31523 Query 125 ACACCAA 131 ||||||| Sbjct 31522 ACACCAA 31516 >seq649 Length=42709 Score = 136 bits (150), Expect = 5e-30 Identities = 108/127 (85%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| | || |||||||||| |||||||||||||||||||||| Sbjct 1148 CTAGAAACCAACAAAATAAGATCGAACGTCCTATTTCATTATTCCATGCTAATGTATTCA 1207 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 |||| ||| |||||| |||||||||||||| |||| |||| ||||| |||| |||| Sbjct 1208 AGCGTTAGCTTGCTTTAAACACTCTAATTTTTTCAAAGTAACAGTCCAAATTCC-CCGCA 1266 Query 125 ACACCAA 131 ||||||| Sbjct 1267 ACACCAA 1273 >seq584 Length=89288 Score = 136 bits (150), Expect = 5e-30 Identities = 108/127 (85%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| | || |||||||||| |||||||||||||||||||||| Sbjct 88141 CTAGAAACCAACAAAATAAGATCGAACGTCCTATTTCATTATTCCATGCTAATGTATTCA 88082 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 |||| ||| |||||| |||||||||||||| |||| |||| ||||| |||| |||| Sbjct 88081 AGCGTTAGCTTGCTTTAAACACTCTAATTTTTTCAAAGTAACAGTCCAAATTCC-CCGCA 88023 Query 125 ACACCAA 131 ||||||| Sbjct 88022 ACACCAA 88016 >seq2756 Length=10097 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 3705 CCAACGTAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 3647 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 3646 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 3609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595135443864