Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593135.1_202016-03- 16] 10,252 sequences; 124,731,640 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq539 125 1e-26 >seq539 Length=48646 Score = 125 bits (138), Expect = 1e-26 Identities = 114/141 (81%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| || || |||||| ||| || || ||| | | | Sbjct 45653 GTACGAGAGGAACCGTTGA-TTCGGA-TATTTGGTTCATGCACCTATCCGACAGGATAAT 45710 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 45711 GGTGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 45770 Query 121 GAACGGGGTGATTCTCTCCTG 141 ||||| | |||| | |||| Sbjct 45771 GAACGTGACGATTTTTACCTG 45791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819118640128