Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2593 147 1e-33 seq59 147 1e-33 >seq2593 Length=26768 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 10499 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 10558 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 10559 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 10618 >seq59 Length=186741 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 142841 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 142900 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 142901 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 142960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278370587910