Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq145 116 5e-24 >seq145 Length=112201 Score = 116 bits (128), Expect = 5e-24 Identities = 93/111 (84%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 138 AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTC 197 |||||||||||||||||||||||||||||| ||||||||||| |||||| | || | | Sbjct 42913 AGTGGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCAAGAC-GATT 42855 Query 198 ACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | |||||||||||| |||||| || ||||||||||||||| |||| Sbjct 42854 ATCTCTACGCCTTAGTATGCTCTACTTGCAGACCTGTGTCGGTTTAGGGTA 42804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694324193437