Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq145 107 4e-21 >seq145 Length=112201 Score = 107 bits (118), Expect = 4e-21 Identities = 118/156 (76%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 196 TCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTG 255 || |||| |||||||| |||| ||||||||| | | |||||||| || ||| Sbjct 43019 TCTAGCATCGGGCAGGTATCAGACTCTATACATCCACGCTAGTGTTAGCAGAGTCCGGTG 42960 Query 256 TTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGGCACCCCTT 315 |||| |||||||||||| ||| || ||| ||| | || | |||||||||| Sbjct 42959 TTTTAAGTAAACAGTCGCGCCCCCCTGTTTAGTGCCGCCACTTATT-AGTGGCACCCCTT 42901 Query 316 CTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 ||||| |||||||||||||||||||||||||||||| Sbjct 42900 CTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTT 42865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062280278144