Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2593 345 7e-93 seq59 345 7e-93 >seq2593 Length=26768 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10114 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 10173 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 10174 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 10233 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 10234 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 10293 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10294 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 10353 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 10354 AAGAGCTCTCAATCTGTC 10371 >seq59 Length=186741 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 142456 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 142515 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 142516 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 142575 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 142576 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 142635 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 142636 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 142695 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 142696 AAGAGCTCTCAATCTGTC 142713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796713014589