Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4626 462 4e-128 seq3219 462 4e-128 seq882 462 4e-128 seq661 462 4e-128 seq59 462 4e-128 >seq4626 Length=3558 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 1161 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 1220 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1221 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 1280 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1281 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1340 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1341 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 1400 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1401 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1456 >seq3219 Length=7993 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 7055 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 7114 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 7115 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 7174 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7175 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 7234 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7235 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 7294 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 7295 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 7350 >seq882 Length=45769 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 939 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 880 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 879 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 820 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 819 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 760 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 759 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 700 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 699 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 644 >seq661 Length=37521 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 36583 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 36642 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 36643 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 36702 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 36703 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 36762 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 36763 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 36822 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 36823 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 36878 >seq59 Length=186741 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 138244 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 138303 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 138304 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 138363 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 138364 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 138423 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 138424 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 138483 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 138484 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 138539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854303717664