Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2593 96.9 2e-18 seq59 96.9 2e-18 >seq2593 Length=26768 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 9920 TCCGAAGGC-CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 9976 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || | |||||| Sbjct 9977 GGCAGGGACGTAAT-CAGCACAAGCT 10001 >seq59 Length=186741 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 142262 TCCGAAGGC-CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 142318 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || | |||||| Sbjct 142319 GGCAGGGACGTAAT-CAGCACAAGCT 142343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300768221420