Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2593 138 1e-30 seq59 138 1e-30 >seq2593 Length=26768 Score = 138 bits (152), Expect = 1e-30 Identities = 126/158 (80%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||||| || |||||||||| |||||||||||||||||||||| Sbjct 10762 CTAGAAACCAACAAAATAGGATCGAACGTCCTATTTCATTATTCCATGCTAATGTATTCA 10821 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 |||| ||| |||||| |||||||||||||| |||| |||| ||||| |||| | | Sbjct 10822 AGCGTTAGCTTGCTTTAAACACTCTAATTTTTTCAAAGTAACAGTCCAAATTCCCCGAAA 10881 Query 126 CACCAA--TGAAGGCATACGGGCTCACCAAGAGGTAGG 161 |||||| | | ||||| || ||| || || | ||| Sbjct 10882 CACCAAATTAATGGCATTACGGTTCATCAGGAAGGAGG 10919 >seq59 Length=186741 Score = 138 bits (152), Expect = 1e-30 Identities = 126/158 (80%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||||| || |||||||||| |||||||||||||||||||||| Sbjct 143104 CTAGAAACCAACAAAATAGGATCGAACGTCCTATTTCATTATTCCATGCTAATGTATTCA 143163 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 |||| ||| |||||| |||||||||||||| |||| |||| ||||| |||| | | Sbjct 143164 AGCGTTAGCTTGCTTTAAACACTCTAATTTTTTCAAAGTAACAGTCCAAATTCCCCGAAA 143223 Query 126 CACCAA--TGAAGGCATACGGGCTCACCAAGAGGTAGG 161 |||||| | | ||||| || ||| || || | ||| Sbjct 143224 CACCAAATTAATGGCATTACGGTTCATCAGGAAGGAGG 143261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595135022946