Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq145 116 6e-24 >seq145 Length=112201 Score = 116 bits (128), Expect = 6e-24 Identities = 147/198 (74%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCT-CCTCTC 138 ||||||| ||||||||| ||||| |||||| |||||||| | |||| |||| | Sbjct 45635 AACTGGTAAACCAGAGGTCACTCCATTTAAGTCCTCGCGTACTAAAAATAGCTTCCTC-C 45577 Query 139 AAATTTCCTACGCCCACGACG-GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAG 197 | |||| || ||| | | ||||| ||| |||| |||||| ||| || ||||||| Sbjct 45576 TTACTTCCAACTCCCTCCAGTAGATAGAAGCCGTACTGACTCGCGTCGTACTTAACCCAG 45517 Query 198 CTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGA 257 ||| ||| || |||| | ||||||||||| ||||||| | |||| | | || | |||| Sbjct 45516 CTCACGTACCCTTTTACTCGGCGAACAGCCGAACCCTTAGAACCTTATACTGCTCTAGGA 45457 Query 258 TGAGACGAGCCGACATCG 275 | || |||||||||||| Sbjct 45456 TAGGATGAGCCGACATCG 45439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780714761284