Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593145.1_202016-03- 16] 11,269 sequences; 138,327,084 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq145 78.8 3e-12 >seq145 Length=112201 Score = 78.8 bits (86), Expect = 3e-12 Identities = 71/88 (81%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458 || |||| ||||| ||||||||||| |||||||||||| |||||||||||||||||| Sbjct 82622 AGTCCCGACTAACCTCGTGCCAGCAGTCGCGGTAATACGAGGGGGGCTAGCGTTATCCGT 82681 Query 459 AATTACTGGGGCGTAAAGGGTGCGTAGG 486 | | | |||| ||||| || ||||| Sbjct 82682 CTTGAAT-GGGCCTAAAGTGTCTGTAGG 82708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497431235456