Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593155.1_202016-03- 16] 10,735 sequences; 122,873,294 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3303 147 1e-33 seq1881 147 1e-33 seq1347 147 1e-33 seq896 147 1e-33 seq500 147 1e-33 seq346 147 1e-33 seq301 147 1e-33 seq58 147 1e-33 seq553 140 2e-31 >seq3303 Length=4879 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 3954 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 3895 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3894 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3835 >seq1881 Length=13602 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 926 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 985 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 986 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1045 >seq1347 Length=32214 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 12998 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 13057 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 13058 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 13117 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 31289 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 31230 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 31229 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 31170 >seq896 Length=46539 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 45614 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 45555 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 45554 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 45495 >seq500 Length=39404 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 926 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 985 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 986 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1045 >seq346 Length=59818 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 58893 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 58834 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 58833 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 58774 >seq301 Length=175246 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 47822 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 47763 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 47762 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 47703 >seq58 Length=135075 Score = 147 bits (162), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| Sbjct 926 GAACCCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCA 985 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 986 TCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1045 >seq553 Length=37611 Score = 140 bits (154), Expect = 2e-31 Identities = 101/116 (87%), Gaps = 3/116 (3%) Strand=Plus/Plus Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCGCCCG 61 ||||| |||||| |||| ||||||| ||||| |||||| ||| ||||||| ||| Sbjct 30225 CCAAACACTTTGGTTTCCCGTAAGGCGCCGAATGAGTCATTAAAAAATTAACATCATCCG 30284 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 30285 ATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 30340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278371981650