Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593155.1_202016-03- 16] 10,735 sequences; 122,873,294 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3303 345 7e-93 seq1881 345 7e-93 seq1347 345 7e-93 seq896 345 7e-93 seq500 345 7e-93 seq346 345 7e-93 seq301 345 7e-93 seq58 345 7e-93 >seq3303 Length=4879 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4339 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 4280 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 4279 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 4220 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 4219 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 4160 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4159 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 4100 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 4099 AAGAGCTCTCAATCTGTC 4082 >seq1881 Length=13602 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 600 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 601 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 660 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 661 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 720 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 780 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 781 AAGAGCTCTCAATCTGTC 798 >seq1347 Length=32214 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12613 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 12672 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 12673 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 12732 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 12733 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 12792 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12793 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 12852 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 12853 AAGAGCTCTCAATCTGTC 12870 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31674 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 31615 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 31614 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 31555 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 31554 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 31495 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31494 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 31435 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 31434 AAGAGCTCTCAATCTGTC 31417 >seq896 Length=46539 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45999 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 45940 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 45939 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 45880 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 45879 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 45820 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45819 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 45760 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 45759 AAGAGCTCTCAATCTGTC 45742 >seq500 Length=39404 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 600 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 601 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 660 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 661 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 720 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 780 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 781 AAGAGCTCTCAATCTGTC 798 >seq346 Length=59818 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59278 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 59219 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 59218 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 59159 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 59158 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 59099 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59098 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 59039 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 59038 AAGAGCTCTCAATCTGTC 59021 >seq301 Length=175246 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 48207 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 48148 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 48147 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 48088 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 48087 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 48028 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 48027 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 47968 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 47967 AAGAGCTCTCAATCTGTC 47950 >seq58 Length=135075 Score = 345 bits (382), Expect = 7e-93 Identities = 232/258 (90%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 ACTCGATGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 600 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | || |||||||||||||||||| || Sbjct 601 CCTGTTATTGCCTCAAACTTCCATCGGTTAAACACCGATAGTCCCTCTAAGAAGCTGGCG 660 Query 122 ACC-AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| ||| || | | ||||||||||||||||||||||||||||||| |||||||| Sbjct 661 ACCTAACAATGTTAGGCCTAGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 720 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 780 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 781 AAGAGCTCTCAATCTGTC 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796717136535