Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593205.1_202016-03- 16] 14,476 sequences; 131,334,864 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq9200 369 2e-99 seq8754 369 2e-99 seq7447 369 2e-99 seq7054 369 2e-99 seq7053 369 2e-99 seq186 179 2e-42 seq632 167 1e-38 seq272 156 2e-35 seq958 136 2e-29 seq196 131 7e-28 seq1891 102 3e-19 seq173 80.6 1e-12 >seq9200 Length=968 Score = 369 bits (408), Expect = 2e-99 Identities = 267/305 (88%), Gaps = 4/305 (1%) Strand=Plus/Minus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| || |||||||| | ||| || ||||||||| |||||||||||||||||||||| Sbjct 953 AGGATGTTGACGTAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 894 Query 440 ATCTATGCGAGTGTTTGGGTG-TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| ||||| | |||||| | |||||||||||||| || |||||| Sbjct 893 ATATATGCGAGTGTTAGGGTGATTAAACCCTTACGCGTAATGAAAGT-AATTTTGGTGGG 835 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||| | | | ||||||||||||||||| ||| | || ||| ||||||||||||||| Sbjct 834 AACACTTTTG--TGCACCATCGACCGATCAGGATATTTTTTGATAGATTTGAGTAAGAGC 777 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 776 ATATCTGCTAGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAA 717 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 716 CTCTGATGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 657 Query 679 GGCGA 683 ||||| Sbjct 656 GGCGA 652 >seq8754 Length=1050 Score = 369 bits (408), Expect = 2e-99 Identities = 267/305 (88%), Gaps = 4/305 (1%) Strand=Plus/Plus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| || |||||||| | ||| || ||||||||| |||||||||||||||||||||| Sbjct 16 AGGATGTTGACGTAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 75 Query 440 ATCTATGCGAGTGTTTGGGTG-TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| ||||| | |||||| | |||||||||||||| || |||||| Sbjct 76 ATATATGCGAGTGTTAGGGTGATTAAACCCTTACGCGTAATGAAAGT-AATTTTGGTGGG 134 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||| | | | ||||||||||||||||| ||| | || ||| ||||||||||||||| Sbjct 135 AACACTTTTG--TGCACCATCGACCGATCAGGATATTTTTTGATAGATTTGAGTAAGAGC 192 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 193 ATATCTGCTAGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAA 252 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 253 CTCTGATGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 312 Query 679 GGCGA 683 ||||| Sbjct 313 GGCGA 317 >seq7447 Length=1364 Score = 369 bits (408), Expect = 2e-99 Identities = 267/305 (88%), Gaps = 4/305 (1%) Strand=Plus/Minus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| || |||||||| | ||| || ||||||||| |||||||||||||||||||||| Sbjct 1349 AGGATGTTGACGTAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 1290 Query 440 ATCTATGCGAGTGTTTGGGTG-TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| ||||| | |||||| | |||||||||||||| || |||||| Sbjct 1289 ATATATGCGAGTGTTAGGGTGATTAAACCCTTACGCGTAATGAAAGT-AATTTTGGTGGG 1231 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||| | | | ||||||||||||||||| ||| | || ||| ||||||||||||||| Sbjct 1230 AACACTTTTG--TGCACCATCGACCGATCAGGATATTTTTTGATAGATTTGAGTAAGAGC 1173 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1172 ATATCTGCTAGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAA 1113 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 1112 CTCTGATGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 1053 Query 679 GGCGA 683 ||||| Sbjct 1052 GGCGA 1048 >seq7054 Length=1478 Score = 369 bits (408), Expect = 2e-99 Identities = 267/305 (88%), Gaps = 4/305 (1%) Strand=Plus/Minus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| || |||||||| | ||| || ||||||||| |||||||||||||||||||||| Sbjct 953 AGGATGTTGACGTAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 894 Query 440 ATCTATGCGAGTGTTTGGGTG-TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| ||||| | |||||| | |||||||||||||| || |||||| Sbjct 893 ATATATGCGAGTGTTAGGGTGATTAAACCCTTACGCGTAATGAAAGT-AATTTTGGTGGG 835 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||| | | | ||||||||||||||||| ||| | || ||| ||||||||||||||| Sbjct 834 AACACTTTTG--TGCACCATCGACCGATCAGGATATTTTTTGATAGATTTGAGTAAGAGC 777 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 776 ATATCTGCTAGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAA 717 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 716 CTCTGATGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 657 Query 679 GGCGA 683 ||||| Sbjct 656 GGCGA 652 Score = 212 bits (234), Expect = 3e-52 Identities = 153/177 (86%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | ||||| |||||||||||| ||||||| ||||||||||||||||||| |||| | Sbjct 1465 TTCTAAGAGTCAAGTTGTTTGGGATTGCAGCTTAAAATGGGAGGTAAATTTCTCCTAAGG 1406 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| ||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 1405 CTAAATAACGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 1346 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 ||| ||||||||||||| || |||||||||||||||||||||| || ||| | |||| Sbjct 1345 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGCCAG 1289 >seq7053 Length=1478 Score = 369 bits (408), Expect = 2e-99 Identities = 267/305 (88%), Gaps = 4/305 (1%) Strand=Plus/Plus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| || |||||||| | ||| || ||||||||| |||||||||||||||||||||| Sbjct 526 AGGATGTTGACGTAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 585 Query 440 ATCTATGCGAGTGTTTGGGTG-TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| ||||| | |||||| | |||||||||||||| || |||||| Sbjct 586 ATATATGCGAGTGTTAGGGTGATTAAACCCTTACGCGTAATGAAAGT-AATTTTGGTGGG 644 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||| | | | ||||||||||||||||| ||| | || ||| ||||||||||||||| Sbjct 645 AACACTTTTG--TGCACCATCGACCGATCAGGATATTTTTTGATAGATTTGAGTAAGAGC 702 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 703 ATATCTGCTAGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAA 762 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 763 CTCTGATGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 822 Query 679 GGCGA 683 ||||| Sbjct 823 GGCGA 827 Score = 212 bits (234), Expect = 3e-52 Identities = 153/177 (86%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | ||||| |||||||||||| ||||||| ||||||||||||||||||| |||| | Sbjct 14 TTCTAAGAGTCAAGTTGTTTGGGATTGCAGCTTAAAATGGGAGGTAAATTTCTCCTAAGG 73 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| ||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 74 CTAAATAACGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 133 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 ||| ||||||||||||| || |||||||||||||||||||||| || ||| | |||| Sbjct 134 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGCCAG 190 >seq186 Length=65880 Score = 179 bits (198), Expect = 2e-42 Identities = 120/134 (90%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 510 GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGG 569 |||||||||||||||||| ||| | || ||| ||||||||||||||||| ||| | | Sbjct 62620 GTGCACCATCGACCGATCAGGATATTTTTTGATAGATTTGAGTAAGAGCATGTCTGCTAG 62561 Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 62560 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAACTCTGATGGAG 62501 Query 630 GCTCGCAGCGGTTC 643 ||||| |||||||| Sbjct 62500 GCTCGTAGCGGTTC 62487 >seq632 Length=47146 Score = 167 bits (184), Expect = 1e-38 Identities = 141/172 (82%), Gaps = 5/172 (3%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAA-TTTCTTCTAAAGCTAAA 98 ||||| ||||||||| || || |||| |||||||||||||| ||||| |||| |||||| Sbjct 28710 GAGTCAAGTTGTTTGTGATTGTAGCTTAAAATGGGAGGTAAAATTTCTCCTAAGGCTAAA 28769 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | || |||||||||||||| |||||| |||| ||||||||||||| |||||| | Sbjct 28770 TAATAGCGAGAGACCGATAGCGAGCAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAA 28829 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 | ||||||| ||| |||||||||||||||||||| || ||| | |||| Sbjct 28830 A----AGTTAAATAGCGCGTGAAATTGTTGAAAGGGATACGATTGAAGCCAG 28877 >seq272 Length=140101 Score = 156 bits (172), Expect = 2e-35 Identities = 119/141 (84%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 70 ATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAG 129 ||||||||||||||||| |||| |||||||| ||| ||||||| ||||| |||||| Sbjct 137483 ATGGGAGGTAAATTTCTCCTAAGGCTAAATAACGGCGAGAGACCAATAGCAAACAAGTTC 137424 Query 130 AGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGA 189 |||| ||||||||||||| |||||| ||||||||||||| || ||||||||||||||| Sbjct 137423 CGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAATAGTACGTGAAATTGTTGA 137364 Query 190 AAGGGAAGCGCTTGCAACCAG 210 ||||||| | ||| | |||| Sbjct 137363 AAGGGAAATGATTGAAGCCAG 137343 >seq958 Length=31110 Score = 136 bits (150), Expect = 2e-29 Identities = 99/113 (88%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||| ||||||| ||||||| ||||||| | |||||||||||| |||| Sbjct 15065 GGACCCGAAAGATGGTAAACTATGTCTGAATACGGTGAAGTC-GAGGAAACTCTGATGGA 15123 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||||| ||||||| ||||||||| ||||| |||||||||||||||| || Sbjct 15124 AGCTCGC---GGTTCTGACGTGCAAATTGATCGACAAATTTGGGTATAGGAGC 15173 >seq196 Length=119343 Score = 131 bits (144), Expect = 7e-28 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 ||||||| ||||| |||||||||||||||||| ||||||||| ||| |||||| ||||| Sbjct 62960 TGCAGCTTAAAATGAGAGGTAAATTTCTTCTAAGGCTAAATATCGGCGAGAGACTGATAG 63019 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAG 173 || ||||||| |||| ||||||||||| |||||| ||||||||||||| || Sbjct 63020 CGAACAAGTACCGTGAAAAAAAGATGAAAAATACTTTGAAAAGAGAGTTAAATAG 63074 >seq1891 Length=29493 Score = 102 bits (112), Expect = 3e-19 Identities = 89/107 (83%), Gaps = 4/107 (4%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||| ||||| ||| ||||||| ||||||||||| ||| | |||||||||||| ||||| Sbjct 13059 GACCCAAAAGACGGTAAACTATGTCTGAATAGGGTTAAGTC-GAGGAAACTCTGATGGAG 13117 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 ||||| |||||||| ||||||| ||||||||| || |||||| Sbjct 13118 GCTCGTAGCGGTTC--ATATGCAAATTAATCGTCAAACTT-GGTATA 13161 >seq173 Length=116029 Score = 80.6 bits (88), Expect = 1e-12 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | ||||| |||||||||||| ||||||| ||||||||||||||||||| |||| | Sbjct 73316 TTCTAAGAGTCAAGTTGTTTGGGATTGCAGCTTAAAATGGGAGGTAAATTTCTCCTAAGG 73375 Query 94 CTAA 97 |||| Sbjct 73376 CTAA 73379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079689489800