Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593205.1_202016-03- 16] 14,476 sequences; 131,334,864 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq6861 462 4e-128 seq1835 462 4e-128 seq638 462 4e-128 seq198 462 4e-128 seq74 462 4e-128 >seq6861 Length=1543 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 355 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 414 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 415 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 474 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 475 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 534 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 535 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 594 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 595 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 650 >seq1835 Length=19635 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 1189 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 1130 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1129 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 1070 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1069 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1010 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1009 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 950 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 949 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 894 >seq638 Length=35396 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 35010 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 35069 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 35070 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 35129 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35130 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 35189 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 35190 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 35249 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 35250 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 35305 >seq198 Length=63599 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 387 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 328 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 327 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 268 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 267 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 208 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 207 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 148 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 147 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 92 >seq74 Length=87275 Score = 462 bits (512), Expect = 4e-128 Identities = 281/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 86889 TACTAAGTTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 86948 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 86949 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACTG 87008 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 87009 AATTCTGCTTCAGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 87068 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 87069 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAACC 87128 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 87129 TCAAATTTCGAGGAACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 87184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854276317056