Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593205.1_202016-03- 16] 14,476 sequences; 131,334,864 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2830 136 5e-30 seq384 136 5e-30 >seq2830 Length=8255 Score = 136 bits (150), Expect = 5e-30 Identities = 108/127 (85%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| | || |||||||||| |||||||||||||||||||||| Sbjct 7108 CTAGAAACCAACAAAATAAGATCGAACGTCCTATTTCATTATTCCATGCTAATGTATTCA 7049 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 |||| ||| |||||| |||||||||||||| |||| |||| ||||| |||| |||| Sbjct 7048 AGCGTTAGCTTGCTTTAAACACTCTAATTTTTTCAAAGTAACAGTCCAAATTCC-CCGCA 6990 Query 125 ACACCAA 131 ||||||| Sbjct 6989 ACACCAA 6983 >seq384 Length=51119 Score = 136 bits (150), Expect = 5e-30 Identities = 108/127 (85%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||| | || |||||||||| |||||||||||||||||||||| Sbjct 49972 CTAGAAACCAACAAAATAAGATCGAACGTCCTATTTCATTATTCCATGCTAATGTATTCA 49913 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 |||| ||| |||||| |||||||||||||| |||| |||| ||||| |||| |||| Sbjct 49912 AGCGTTAGCTTGCTTTAAACACTCTAATTTTTTCAAAGTAACAGTCCAAATTCC-CCGCA 49854 Query 125 ACACCAA 131 ||||||| Sbjct 49853 ACACCAA 49847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595116531384