Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593205.1_202016-03- 16] 14,476 sequences; 131,334,864 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2830 351 2e-94 seq384 351 2e-94 >seq2830 Length=8255 Score = 351 bits (388), Expect = 2e-94 Identities = 266/311 (86%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG-CTTTGGCGGGTCGCCGGCTTCTTA 78 || |||||||||||||||||||||||| ||||| | ||| ||||||| |||||||| Sbjct 7590 GAACGAGACCTTAACCTGCTAAATAGCTAGGCCTAACATTGTTAGGTCGCCAGCTTCTTA 7649 Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| Sbjct 7650 GAGGGACTATCGGTGTTTAACCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 7709 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||||||||||||||||||||| || || ||||||||| |||| Sbjct 7710 TAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCATCGAGTTCATTTCCTTTAT 7769 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 |||||| | ||||||||||| | ||||| ||||||||||||||||||||||||| ||| Sbjct 7770 CGGAAGATATGGGTAATCTTTTGAAACTTCATCGTGCTGGGGATAGAGCATTGCAACTAT 7829 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 ||||||| |||||||||| ||||||||| | |||| ||| | | |||||||||||| Sbjct 7830 TGCTCTTGAACGAGGAATCCCTAGTAAGTACAAGTCACTAGCTTGTGCTGATTACGTCCC 7889 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 7890 TGCCCTTTGTA 7900 >seq384 Length=51119 Score = 351 bits (388), Expect = 2e-94 Identities = 266/311 (86%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG-CTTTGGCGGGTCGCCGGCTTCTTA 78 || |||||||||||||||||||||||| ||||| | ||| ||||||| |||||||| Sbjct 50454 GAACGAGACCTTAACCTGCTAAATAGCTAGGCCTAACATTGTTAGGTCGCCAGCTTCTTA 50513 Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| Sbjct 50514 GAGGGACTATCGGTGTTTAACCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 50573 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||||||||||||||||||||| || || ||||||||| |||| Sbjct 50574 TAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCATCGAGTTCATTTCCTTTAT 50633 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 |||||| | ||||||||||| | ||||| ||||||||||||||||||||||||| ||| Sbjct 50634 CGGAAGATATGGGTAATCTTTTGAAACTTCATCGTGCTGGGGATAGAGCATTGCAACTAT 50693 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 ||||||| |||||||||| ||||||||| | |||| ||| | | |||||||||||| Sbjct 50694 TGCTCTTGAACGAGGAATCCCTAGTAAGTACAAGTCACTAGCTTGTGCTGATTACGTCCC 50753 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 50754 TGCCCTTTGTA 50764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947062883328