Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1008 390 2e-106 seq889 280 3e-73 >seq1008 Length=69757 Score = 390 bits (432), Expect = 2e-106 Identities = 278/315 (88%), Gaps = 3/315 (1%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGG 63 || || || |||| ||||||||||||||| || || ||| ||| |||| ||| | |||| Sbjct 63550 TGCTCTGGTCGGGTCTTTCCTTCTGGGGAGCCAGCGTGCTCTTAACTGAGTGCGTTGGGG 63609 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 | ||||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||| Sbjct 63610 ATCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCTTACGCTTGAATACA 63669 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct 63670 TTAGCATGGAATAATAGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAG 63728 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||| Sbjct 63729 TAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTG 63788 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||||| |||||||||| |||||||||| || |||||||||||||||||||||| | Sbjct 63789 GATTTATGAAAGACTAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AG 63847 Query 304 AACGAAAGTTAGGGG 318 ||||||||||||||| Sbjct 63848 AACGAAAGTTAGGGG 63862 >seq889 Length=2049 Score = 280 bits (310), Expect = 3e-73 Identities = 184/202 (91%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 117 GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGG 176 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 GAATACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGA 60 Query 177 ACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAA 236 ||||||||||||||||||||||||| ||||| | |||||||| ||| ||||||||| Sbjct 61 GTCGCCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAA 120 Query 237 ATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTA 296 ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 121 ATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTA 180 Query 297 ATCAGTGAACGAAAGTTAGGGG 318 |||| ||||||| |||||||| Sbjct 181 ATCA-AGAACGAAGGTTAGGGG 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915182483072