Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq889 118 6e-25 seq1008 104 1e-20 >seq889 Length=2049 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 930 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 875 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 874 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 825 >seq1008 Length=69757 Score = 104 bits (114), Expect = 1e-20 Identities = 94/112 (84%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| || | |||||| | || | ||||||||||||||| || |||||| Sbjct 60077 CCGTT-GCCGGTAACAGGACGCCAATCCGGA--GGTCTCACTAAGCCATT-CAATCGGTA 60022 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 60021 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 59972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300794602520