Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05]
1,914 sequences; 46,846,657 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 232 7e-59
seq889 161 1e-37
>seq1008
Length=69757
Score = 232 bits (256), Expect = 7e-59
Identities = 167/190 (88%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||| ||||||||||||||||||||||||||||| ||| ||||||||| | ||| |||||
Sbjct 63608 GGATCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCTTACGCTTGAATA 63667
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||||||||||||| | ||||||||||||| ||||||||||||||
Sbjct 63668 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTCTATTTTGTTGGTTTCTAGGACCG- 63725
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||| |||| ||||||| ||||| | |||||| |||||||| |||||||||||
Sbjct 63726 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTC 63785
Query 181 TTGGATTTAT 190
||||||||||
Sbjct 63786 TTGGATTTAT 63795
>seq889
Length=2049
Score = 161 bits (178), Expect = 1e-37
Identities = 117/134 (87%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 56 GAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGG 115
|||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 1 GAATACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGA 60
Query 116 ACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGA 175
|| |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||
Sbjct 61 GTCG-CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGA 119
Query 176 AATTCTTGGATTTA 189
||||||||||||||
Sbjct 120 AATTCTTGGATTTA 133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511990506560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |