Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophlyctis_20rosea_20[genbank_20GCA_5F002214945.1_202017-07-05] 1,914 sequences; 46,846,657 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq992 627 3e-177 seq1008 102 2e-19 >seq992 Length=2363 Score = 627 bits (694), Expect = 3e-177 Identities = 400/430 (93%), Gaps = 4/430 (1%) Strand=Plus/Minus Query 79 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2363 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 2304 Query 139 GAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATC 198 |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 2303 GAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCCTCTATCCTACCATC 2244 Query 199 GAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGT 258 |||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| Sbjct 2243 GAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCACAAGGCCATGCGATTCGA 2184 Query 259 TAAGTTATTATGAATCACCAA-GGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATA 317 |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| Sbjct 2183 GAAGTTATTATGAATCACCAATGGAGCGGCGAACCGCGTTGGTTTTTTATCTAATAAATA 2124 Query 318 CACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT 375 ||||||| || |||||||||| || | |||||||||||||||||||||||||| ||||| Sbjct 2123 CACCCCTCCCAGAAGTCGGGGCTTGATTGCATGTATTAGCTCTAGAATTACCACAGTTAT 2064 Query 376 CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTC 435 |||||||| || | || ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2063 CCATGTAGCAAAGCACCATCAAATAAACTATAACTGATTTAATGAGCCATTCGCAGTTTC 2004 Query 436 ACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494 || ||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2003 ACAGTACAAACTTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGA 1944 Query 495 CTACTGGCAG 504 |||||||||| Sbjct 1943 CTACTGGCAG 1934 >seq1008 Length=69757 Score = 102 bits (112), Expect = 2e-19 Identities = 70/78 (90%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| | || ||||||||||| |||||||||||||||||| Sbjct 63392 GTACTCATTCCAATTACAAGACTCTAA-GAGCCCTGTATTGTTATTTATTGTCACTACCT 63334 Query 61 CCCCGTGTCGGGATTGGG 78 ||| ||||| |||||||| Sbjct 63333 CCCTGTGTCAGGATTGGG 63316 Score = 100 bits (110), Expect = 9e-19 Identities = 55/55 (100%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62522 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 62468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510371090944