Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1635 143 4e-32 seq2967 131 3e-28 seq2533 75.2 2e-11 seq1661 75.2 2e-11 >seq1635 Length=5516 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 24 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 81 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 82 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 139 >seq2967 Length=6852 Score = 131 bits (144), Expect = 3e-28 Identities = 89/99 (90%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79 ||||||| |||||||| |||||||||| ||| | || |||||||||||||||||||| Sbjct 8 ATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAATGCCGCGAAGCTACCATCTG 66 Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||||| |||||||||||||||||||||||||||||||| Sbjct 67 CTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 105 >seq2533 Length=5828 Score = 75.2 bits (82), Expect = 2e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 75 ATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1 ATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 44 >seq1661 Length=10650 Score = 75.2 bits (82), Expect = 2e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 75 ATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 10650 ATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 10607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819168882944