Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq155 129 3e-28 seq1 111 9e-23 seq445 98.7 6e-19 seq332 89.7 3e-16 seq231 77.0 2e-12 >seq155 Length=72782 Score = 129 bits (142), Expect = 3e-28 Identities = 102/117 (87%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| ||||||||||||| || |||| ||||| Sbjct 41044 GAACCCAAAAACTTTACTTTCGC-TAAGATGCTGAGCGAGTCAAAA-GA-AACA-CGCCC 40989 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 40988 AATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 40932 Score = 107 bits (118), Expect = 1e-21 Identities = 91/107 (85%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 11 ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGT 70 ||||| |||| | || | ||| | ||||||||||| || |||| ||||| ||| ||||| Sbjct 51485 ACTTTACTTTCGC-TAGGATGCTGGGCGAGTCAAAA-GA-AACA-CGCCCAATCTCTAGT 51430 Query 71 CGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 51429 CGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 51383 >seq1 Length=300412 Score = 111 bits (122), Expect = 9e-23 Identities = 98/117 (84%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||| | ||||| |||| | |||| ||| ||||||||||||| || ||| ||||| Sbjct 284607 GAACCCAGAAACTTTACTTTCGC-TAAGATGCTGAGCGAGTCAAAA-GA-AACG-CGCCC 284552 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||||| |||||||| |||||||||||||||||||||| |||| |||||| Sbjct 284551 AATCTCTAGTCGACATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGGCTTCGA 284495 >seq445 Length=36837 Score = 98.7 bits (108), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 38 GAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGA 97 ||||||||| || |||| ||||| ||| |||||||||||||||| |||||||||||||| Sbjct 24539 GAGTCAAAA-GA-AACA-CGCCCAATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGA 24483 Query 98 CGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||| Sbjct 24482 CGGTATCTAATCGTCTTCGA 24463 >seq332 Length=46079 Score = 89.7 bits (98), Expect = 3e-16 Identities = 70/80 (88%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 38 GAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGA 97 ||||||||| || |||| | ||| ||| |||||||||||||||| |||||||||||||| Sbjct 37907 GAGTCAAAA-GA-AACA-CTCCCAATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGA 37851 Query 98 CGGTATCTGATCGTCTTCGA 117 | |||||| ||||||||||| Sbjct 37850 CAGTATCTAATCGTCTTCGA 37831 >seq231 Length=58520 Score = 77.0 bits (84), Expect = 2e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||||| ||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 10916 TCTCTAGTCAGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 10862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278395944060