Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq938 95.1 2e-17 seq493 91.5 3e-16 seq445 91.5 3e-16 seq569 78.8 2e-12 seq197 73.4 7e-11 seq143 73.4 7e-11 >seq938 Length=15498 Score = 95.1 bits (104), Expect = 2e-17 Identities = 112/147 (76%), Gaps = 5/147 (3%) Strand=Plus/Plus Query 157 CTATTTT-GTTGGTTTCTAGG-ACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||| |||||||| ||| || |||||||||||||| | || ||||| | Sbjct 10504 CTATTTTCGTTGGTTT--AGGTACTATAGTAATGATTAATAGAAACGGTTGGGGGCATTT 10561 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC- 273 ||||| | |||||||||||||||||||| |||||| ||||||||||||||| Sbjct 10562 GTATTTGGCCGCTAGAGGTGAAATTCTTGGATTGGCCGAAGACAAACTACTGCGAAAGCA 10621 Query 274 GTTCACCAAGGATGTTTTCATTAATCA 300 || ||| |||| ||||||||| |||| Sbjct 10622 TTTGACCCAGGACGTTTTCATTGATCA 10648 >seq493 Length=34242 Score = 91.5 bits (100), Expect = 3e-16 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 |||||||||||||| | || ||||| | ||||| | ||||||||||||||| Sbjct 21781 GTAATGATTAATAGAAACGGTTGGGGGCATTTGTATTTGGCCGCTAGAGGTGAAATTCTT 21722 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAG 301 ||||| |||||| ||||||||||||||| || ||| |||| ||||||||| |||| Sbjct 21721 GGATTGGCCGAAGACAAACTACTGCGAAAGCATTTGACCCAGGACGTTTTCATTGATCA- 21663 Query 302 TGAACGAAAGTTAGGGG 318 | | ||||||| ||| Sbjct 21662 AGGTCTAAAGTTAAGGG 21646 >seq445 Length=36837 Score = 91.5 bits (100), Expect = 3e-16 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 |||||||||||||| | || ||||| | ||||| | ||||||||||||||| Sbjct 24326 GTAATGATTAATAGAAACGGTTGGGGGCATTTGTATTTGGCCGCTAGAGGTGAAATTCTT 24385 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAG 301 ||||| |||||| ||||||||||||||| || ||| |||| ||||||||| |||| Sbjct 24386 GGATTGGCCGAAGACAAACTACTGCGAAAGCATTTGACCCAGGACGTTTTCATTGATCA- 24444 Query 302 TGAACGAAAGTTAGGGG 318 | | ||||||| ||| Sbjct 24445 AGGTCTAAAGTTAAGGG 24461 >seq569 Length=30398 Score = 78.8 bits (86), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 7/145 (5%) Strand=Plus/Minus Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 126 |||| |||| ||| |||| |||| ||| ||||||||| ||| ||| |||| ||| Sbjct 853 GGACAATTACCATGAGCAAATCAGAGCGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 794 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTTGGTTTCTAGG-ACCGCCGT 184 |||||||||||| |||| ||| | || ||||||| ||||||| |||| || || Sbjct 793 GCATGGAATAATGAAATATGAC-TTTAGTCCTATTTTCGTTGGTT--TAGGTACTATAGT 737 Query 185 AATGATTAATAGGGATAGTCGGGGG 209 |||||||||||| | || ||||| Sbjct 736 AATGATTAATAGAAACGGTTGGGGG 712 >seq197 Length=64906 Score = 73.4 bits (80), Expect = 7e-11 Identities = 82/106 (77%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 126 |||| |||| ||| |||| |||||||| ||||||||| ||| ||| |||| ||| Sbjct 41792 GGACAATTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 41733 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTTGGTTT 171 |||||||||||| |||| ||| | || ||||||| |||||||| Sbjct 41732 GCATGGAATAATGAAATATGAC-TTTAGTCCTATTTTAGTTGGTTT 41688 >seq143 Length=76570 Score = 73.4 bits (80), Expect = 7e-11 Identities = 82/106 (77%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 126 |||| |||| ||| |||| |||||||| ||||||||| ||| ||| |||| ||| Sbjct 1254 GGACAATTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 1195 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTTGGTTT 171 |||||||||||| |||| ||| | || ||||||| |||||||| Sbjct 1194 GCATGGAATAATGAAATATGAC-TTTAGTCCTATTTTCGTTGGTTT 1150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915185777792