Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq825 190 9e-46 seq682 178 5e-42 seq355 167 1e-38 seq884 111 7e-22 seq83 102 3e-19 seq968 96.9 1e-17 seq105 95.1 5e-17 seq20 95.1 5e-17 seq40 78.8 4e-12 >seq825 Length=19190 Score = 190 bits (210), Expect = 9e-46 Identities = 114/120 (95%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 6865 TGATGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAACCCAGAGGAAACTCTG 6924 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 6925 GTGGAGGCTCGTAGCGATTCTGACGTTCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 6984 >seq682 Length=24838 Score = 178 bits (196), Expect = 5e-42 Identities = 111/120 (93%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 8884 TGATGGGACCCGAAAGATGGTGAACTATGACTGAATAGGGTGAAGCCAGAGGAAACTCTG 8943 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||| |||| |||| ||||| |||||||||||||||| |||||||||| ||||||||| Sbjct 8944 GTTGAGACTCGTAGCGATTCTGACGTGCAAATCGATCGTNAAATTTGGGTCTAGGGGCGA 9003 >seq355 Length=43543 Score = 167 bits (184), Expect = 1e-38 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 17425 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTC 17484 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||||||||||||||||||||||||||||| Sbjct 17485 TGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 17524 >seq884 Length=17288 Score = 111 bits (122), Expect = 7e-22 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 ||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||| Sbjct 15125 GCCAGAGGAAACTCTGGTGGAGGGTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAAT 15066 Query 668 TTGGGTATAGGGGCGA 683 |||||||| |||||| Sbjct 15065 GTGGGTATATGGGCGA 15050 >seq83 Length=96909 Score = 102 bits (112), Expect = 3e-19 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||| || |||| ||||| | ||| | ||||||||| |||||||||||||||||| | Sbjct 61559 TAGGTTGTTGGCTTAATGACTCTAAATGACCCGTCTTGAAACACGGACCAAGGAGTCCAC 61618 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGA 487 ||| ||| |||||||||||| ||||||| | ||||||| |||| ||| Sbjct 61619 CATTAGTGCAAGTGTTTGGGTGCCAAACCCATACGCGTAAGGAAACTGA 61667 >seq968 Length=14540 Score = 96.9 bits (106), Expect = 1e-17 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||| || |||| ||||| || ||| | ||||||||| ||||||||||||||||| ||| Sbjct 5547 AGGTTGTTGGCTTAATGATTCTAAATGACCCGTCTTGAAACACGGACCAAGGAGTACAAC 5488 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGA 487 || ||| |||||||||||| ||||| | | |||| || |||| ||| Sbjct 5487 ATTAGTGCAAGTGTTTGGGTGCCAAACACATACGCGCAAGGAAACTGA 5440 >seq105 Length=87212 Score = 95.1 bits (104), Expect = 5e-17 Identities = 122/168 (73%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 ||| |||||||||||| ||||||| | ||||| | |||| ||| | | ||| ||| Sbjct 20425 TGCAAGTGTTTGGGTGCCAAACCCATACGCGTNAGGAAACTGATTGA---TACGAATCCG 20369 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT---GAGTAAGAGCATA 561 ||| ||| |||| ||| |||| || || || ||| ||| | |||| Sbjct 20368 CAAGGAGGCAGTATCGTCCGGCGCTGACGTTTTATACTGAATTGACCGAGACAAAGCACT 20309 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 || | ||||||||||||||||||||||||||||||||||||||||| Sbjct 20308 AATGATNGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 20261 >seq20 Length=154653 Score = 95.1 bits (104), Expect = 5e-17 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||| || |||| ||||| | ||| | ||||||||| |||||||||||||||||| | Sbjct 93424 TAGGTTGTTGGCTTAATGACTCTAAATGACCCGTCTTGAAACACGGACCAAGGAGTCCAC 93483 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAA 478 ||| ||| |||||||||||| ||||||| | ||||||| Sbjct 93484 CATTAGTGCAAGTGTTTGGGTGCCAAACCCATACGCGTAA 93523 >seq40 Length=128943 Score = 78.8 bits (86), Expect = 4e-12 Identities = 71/90 (79%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||| || |||| ||||| ||| | ||||||||| |||||||||||||||||| | Sbjct 103376 TAGGTTGTTGGCTTAATGACNCTAAATGACCCGTCTTGAAACACGGACCAAGGAGTCCAC 103435 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCC 468 ||| ||| |||||| ||||| ||||||| Sbjct 103436 CATTAGTGCAAGTGTTNGGGTGCCAAACCC 103465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079966666700